Pairwise Alignments

Query, 628 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 531 a.a., oligopeptidemurein peptide ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 91/343 (26%), Positives = 137/343 (39%), Gaps = 31/343 (9%)

Query: 55  APKGGTLRQAGFGSFDSLNP-FINKGVAADDISLIYDTLTTNSLDEPFTVYGLLAEKIEK 113
           A + G LR A      +L+P + N       +S IY+ L     D+   +   LA     
Sbjct: 29  AQERGELRIATSYKLMTLDPQYANLNENTSLLSHIYERLVYQ--DDNLELKPGLATSWRP 86

Query: 114 GPNNSWVRFHLRPQARFHDGEPVKAEDVVFTFETLMSKGAPH---YRGYYADVEKVVAES 170
             +  W  F LR + RFHDG    A+DVV+T E +     P    +R Y + ++ V A  
Sbjct: 87  LSDTQWA-FKLRDKVRFHDGSAFDADDVVYTIERIRDFLKPPSGGFRSYVSGIKSVSAPD 145

Query: 171 PRRVRFDFKHAGNRELPMILGQLPVL--PKHWWEDRDFSSGSLEVPLGSGPYRVDKIQAG 228
           P  V  +   A    LP+    L V+  P   +E  +  +     P G+GPYR +   +G
Sbjct: 146 PLTVLIETDGAVPN-LPLFFSSLFVMNRPSKGFETTENLNAG-HPPNGTGPYRFESWSSG 203

Query: 229 RSIRYARVEDYWGKDLPVNRGFYNFDRINFDYYRDNTVALQAFKAGHFDYWFETSAKNWA 288
            S+R AR +DYWG       G   + ++ F    +    + A   G  D      A++ A
Sbjct: 204 ESLRLARNDDYWG-------GKPAWSKVTFRVIENPAARVAALSTGEVDVAHAIPARDVA 256

Query: 289 T-------AYDIAAVRDGRIVKDEIRNYNPTGMQGFIFNIRRPQLEDRRVREALGLLFDY 341
           +          + A R   +  D  R+  P         I  P  ++  VR AL L  D 
Sbjct: 257 SLKQRGAKIASVGAARVNFVQFDVARDTLPGVTDKSGEPIANP-FKNPLVRRALTLATDR 315

Query: 342 EWTNRQLFNGAYTRTRSYFDNSELASSG--LPDA---DELKVL 379
                ++  G  T     F N    +S   LP+A   DE K+L
Sbjct: 316 GILVDKILAGYGTAAAQVFPNGLPGTSANLLPEAPNYDEAKML 358