Pairwise Alignments

Query, 357 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  160 bits (406), Expect = 3e-44
 Identities = 106/353 (30%), Positives = 167/353 (47%), Gaps = 42/353 (11%)

Query: 1   MLAYIFRRLLLIIPTLFGILLINFIIIQAAPGGPVEQAIAKLEGFEGATSRIAGGGSEVA 60
           ML +  RR+L IIPT+  + L+ F+I    PG                            
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPG--------------------------TF 34

Query: 61  VAGTSYRGAQGLDPELVAEIERLYGFDKPPVERFWIMLSNYLRLDFGESFFRDAKVTDLI 120
            A     G +  DP+++A +   +G +KP +ERF   +++  + D G SF     V DLI
Sbjct: 35  AASLFADGRRAADPQMIARLNEEFGLNKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLI 94

Query: 121 IEKMPVSISLGLWSTLIMYLASIPLGIAKATRHGSKFDVWTSSAIIVGYAIPAFLFAILL 180
            ++M  S+ L + + +   + S+PLG   A R GS  D  T    + G ++P F   +L+
Sbjct: 95  NDRMWASLQLAIAAMIFALVISVPLGFVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLM 154

Query: 181 IVLFAGGSYWNWFPLRGLTSANFDDLSLGGKIIDYFWHLALPVTALVIGNFATLTLLTKN 240
           + LFA     NW P  G    +F              +L LP   L +   A L   T+ 
Sbjct: 155 MYLFA--LQLNWLPSFGYGDGSFR-------------NLILPAVTLGVTPLALLARTTRA 199

Query: 241 SFLDEINKQYVITARAKGLSKNRVLYGHVFRNAMLIIIAGFPAAFIGMFFTGSLLIEVIF 300
             LD +N  ++ TA +KG+S+ +V+  HV RNA+++I+      F G     +++IE +F
Sbjct: 200 GVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALVLIVTTVGLQF-GSLIGQAVVIEKLF 258

Query: 301 SLDGLGLLSFEAAINRDYPVVFGTLFLFTLLGLVVKLIGDLTYTLVDPRIDFE 353
           +  G+G L  ++  +RD PVV GT+ +  L  LV+    DL Y  +DPRI  E
Sbjct: 259 AWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVINTAVDLIYAAIDPRIKQE 311