Pairwise Alignments

Query, 339 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 363 a.a., mureinpeptideoligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  131 bits (330), Expect = 2e-35
 Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 12/241 (4%)

Query: 109 LQVPAPAPPSLENWLGTDDQGRDVLARVIYGFRISVLFALTLTLISSVIGVIAGALQGFY 168
           L +  PA       LGTD  GRDVL+R+IYG RIS+   L    +S V+G++ G L G++
Sbjct: 125 LHLVCPAEGGQLFLLGTDRLGRDVLSRIIYGARISLTIGLLGITVSFVLGIVIGGLAGYH 184

Query: 169 GGWVDLVGQRLLEIWSGLPVLYLLIILASFVQPNFWWLLGIML-------LFSWMSLVDV 221
           GG  DLV QRL+E+   +P + L + LA+ + P  W  L I L       L  W  L   
Sbjct: 185 GGIFDLVVQRLIEVLQSIPSIPLWLSLAA-IMPATWSPLLIYLGITVILGLLDWTGLARA 243

Query: 222 VRAEFLRGRNLEYVRAARALGMQNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDF 281
           VR++ L  R  +YV AA+ +G ++G I+ RH++P  M   +      + G I   TAL F
Sbjct: 244 VRSKLLALREEDYVLAAQLMGARSGRIIGRHLVPGFMSHLIATATISIPGMILGETALSF 303

Query: 282 LGFGLPAGSPSLGELVAQGKANLQA---PWLGISAFMVLAIMLTLLVFIGEAARDAFDPR 338
           LG GL     S G L+ + K+       PWL      V+ ++L    F+G+  RDA DP 
Sbjct: 304 LGLGLRPPITSWGILLTEAKSVSVIAFYPWLLFPTIPVILVILA-FNFLGDGLRDAADPY 362

Query: 339 K 339
           K
Sbjct: 363 K 363