Pairwise Alignments

Query, 339 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 376 a.a., oligopeptide uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  145 bits (365), Expect = 2e-39
 Identities = 81/216 (37%), Positives = 126/216 (58%), Gaps = 1/216 (0%)

Query: 124 GTDDQGRDVLARVIYGFRISVLFALTLTLISSVIGVIAGALQGFYGGWVDLVGQRLLEIW 183
           GTD  GRD+L RV+ G +IS+   L  +L+S  IGV+ GA  G+ GG VD V  RL+EI 
Sbjct: 159 GTDSNGRDLLVRVMLGGQISIAVGLLASLVSLGIGVVYGATSGYIGGRVDNVMMRLVEIL 218

Query: 184 SGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGM 243
             LP ++L+++L  F   +F  +  ++    W+ +  +VR + L  +  E+V AA+ALG+
Sbjct: 219 YSLPFVFLVVVLVVFFGRSFILIFLVIGAVEWLDMARIVRGQTLALKRREFVGAAQALGL 278

Query: 244 QNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKAN 303
            +  I+ RHI+PN +   + F+  ++   I   + L FLG G+ A   S G L+++G  N
Sbjct: 279 TDWQIIRRHIIPNTIGPVIVFVTVVVPKVILLESFLSFLGLGVQAPLTSWGALISEGANN 338

Query: 304 LQ-APWLGISAFMVLAIMLTLLVFIGEAARDAFDPR 338
           +Q APWL I   +   + L  L F+G+  RDA DP+
Sbjct: 339 IQSAPWLLIFPAIFFVVTLFSLNFVGDGLRDALDPK 374