Pairwise Alignments

Query, 339 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 291 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  132 bits (331), Expect = 1e-35
 Identities = 69/218 (31%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 123 LGTDDQGRDVLARVIYGFRISVLFALTLTLISSVIGVIAGALQGFYGGWVDLVGQRLLEI 182
           LGTD  GRD+++ ++YG RIS++ ++  + ++++IG+ AG    ++G WVD+   RL+++
Sbjct: 70  LGTDGLGRDIVSTILYGLRISLVVSIVSSALAALIGLTAGVSAAYFGKWVDIAIMRLVDL 129

Query: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242
              LP + + +I    + P    ++  +++  W +   + R   L   N  Y+ AAR + 
Sbjct: 130 QLSLPTILIALIAIVTLGPGIDRIILALIIAQWATYARIARGVALSEANKPYMDAARLMR 189

Query: 243 MQNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKA 302
           +    I+FRH+LPN++   +T +P  +  A+     L FLG G+P   PSLG  VA G  
Sbjct: 190 LPTSRIIFRHLLPNSIAPAVTLIPIEVGHAVALEATLSFLGLGVPIDKPSLGSAVANGFQ 249

Query: 303 NLQAPWLGISAFMVLAI--MLTLLVFIGEAARDAFDPR 338
            L      IS F  LA+  ++  +  +GE  R + DPR
Sbjct: 250 YLLTGQYWISLFPGLALFGLIASINLVGEDVRRSLDPR 287