Pairwise Alignments

Query, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  422 bits (1084), Expect = e-122
 Identities = 226/555 (40%), Positives = 354/555 (63%), Gaps = 35/555 (6%)

Query: 9   NLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPYPL 68
           +L+EV++L +E+ +   V   V+ +T DI++GE + +VGESG+GKS   ++++ LL  P 
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP- 60

Query: 69  ARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHK 128
                G++  +G+ +     +AMR++RG++I  +FQ+PMTSLNPL TV  Q+ E +  + 
Sbjct: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120

Query: 129 GLRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIADEP 188
            +  + A  R L L++ VGIP+P  R++ YPH+ SGG RQRVVIA+ALA EP+L+IADEP
Sbjct: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180

Query: 189 TTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQALCED 248
           TTALDV++Q +IL L++EL  +  +  +L++HD+ +V  +  RV VM RG +VE      
Sbjct: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240

Query: 249 LFRAPQHPYTQELLAAEPSGG------PVA--VEEAP----------------------- 277
           +   P+HPYT+ L++A P         P+   +EEA                        
Sbjct: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300

Query: 278 PLLEVDDLRVWFPIKKGLLRRTVDHIKAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAIL 337
           PLL+V+++ + F  K  L     ++++A + V+F++ +G+T G+VGESGSGKST+   I 
Sbjct: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360

Query: 338 RLL-GSRGEIRFQGQHLQSM-SQRQVRPLRRQMQVVFQDPFGSLSPRMSVGQIVGEGLHI 395
            L   + G + F+G  L ++ S+ + RPLRRQMQ+VFQ+P+ S++PRM +  I+ E +  
Sbjct: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420

Query: 396 HRMGNAKEQEQAIIEALVE-VGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDE 454
           H++  ++ + + I+  L+E VGL      +YPHEFSGGQRQRI+IARAL  +P L++ DE
Sbjct: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE 480

Query: 455 PTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMMVVKQGQVVEQGAAA 514
           PTSALD +VQ Q++ LL+ LQ + NLT LFISHDL V+R +  ++ V++ G ++E     
Sbjct: 481 PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTE 540

Query: 515 DIFAAPQHPYTQQLL 529
            +F  PQH Y+++L+
Sbjct: 541 QLFTDPQHEYSKKLI 555



 Score =  181 bits (458), Expect = 9e-50
 Identities = 113/265 (42%), Positives = 158/265 (59%), Gaps = 15/265 (5%)

Query: 10  LVEVRDLAVEFVTGEQV-------QRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILR 62
           L++V ++ + FVT + +        +    V+F + +GET  LVGESGSGKS  A  I  
Sbjct: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361

Query: 63  LLPYPLARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINE 122
           L   P A    G++ F G DL     +  R+    ++ MVFQ P TS+NP   +   I E
Sbjct: 362 LYQ-PNA----GRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAE 416

Query: 123 VLEIHKGLRGKAATARTL-ELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPE 181
            +  HK  R ++ T + + +LLE VG+ +       YPHE SGGQRQR+ IA ALA  P 
Sbjct: 417 PIRFHKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARALATRPR 474

Query: 182 LLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVV 241
           LLI DEPT+ALDV+VQ +IL LLK+LQ  L + +L ISHDL ++R++  RV VMQ G ++
Sbjct: 475 LLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLL 534

Query: 242 EQALCEDLFRAPQHPYTQELLAAEP 266
           E A  E LF  PQH Y+++L++  P
Sbjct: 535 EVAPTEQLFTDPQHEYSKKLISLMP 559



 Score =  174 bits (442), Expect = 6e-48
 Identities = 96/261 (36%), Positives = 161/261 (61%), Gaps = 15/261 (5%)

Query: 279 LLEVDDLRVWFPIKKGLLRRTVDHIKAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAILR 338
           LLEV +LR+ +P + G+         AV  +   + +G+ +G+VGESG+GKST+G A++ 
Sbjct: 3   LLEVKNLRIEYPSRHGVHA-------AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55

Query: 339 LLG-----SRGEIRFQGQHLQSMSQRQVRPLR-RQMQVVFQDPFGSLSPRMSVGQIVGEG 392
           LL      + GE+   G+ +  +S + +R +R  ++  +FQDP  SL+P  +V   + E 
Sbjct: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115

Query: 393 LHIHRMGNAKEQEQAIIEALVEVGL-DPETR-HRYPHEFSGGQRQRIAIARALVLKPALI 450
           +H +   +A+E  Q  +  + +VG+  PE R  +YPH+FSGG RQR+ IA AL  +P LI
Sbjct: 116 IHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLI 175

Query: 451 LLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMMVVKQGQVVEQ 510
           + DEPT+ALD ++Q Q++ L+R L  K N+  + ++HD+ VV  ++ ++ V+ +G +VE 
Sbjct: 176 IADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEF 235

Query: 511 GAAADIFAAPQHPYTQQLLES 531
           G  A +   P+HPYT+ L+ +
Sbjct: 236 GPTAKVLGTPEHPYTRSLISA 256