Pairwise Alignments

Query, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  452 bits (1162), Expect = e-131
 Identities = 242/530 (45%), Positives = 345/530 (65%), Gaps = 8/530 (1%)

Query: 9   NLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPYPL 68
           +L+EV+DL V+F++     R   GV+F +  GETL ++GESGSGKSV+A +I+ L+  P 
Sbjct: 5   HLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPP 64

Query: 69  ARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHK 128
                G + + G+DL    E   R + G RIAM+FQ+P++ LNP++T+G Q+ EV  +H 
Sbjct: 65  GDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHG 124

Query: 129 GLRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIADEP 188
              G  A  R +E+L  VGIPEP KRI  YPH+ SGGQRQR++I MA+A  PE+LIADEP
Sbjct: 125 VASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEP 184

Query: 189 TTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQALCED 248
           TTALDV+VQ +ILELLK+LQA  G+A+++I+HDL +   +A RV VM+ GR+VE+     
Sbjct: 185 TTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARA 244

Query: 249 LFRAPQHPYTQELLAAEPSGGPVAVEE-----APPLLEVDDLRVWFPIKKGLLRRTVDHI 303
           +F  P H YT+ L+ A P     A          P+LEV ++  ++ +  G   +    +
Sbjct: 245 VFENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFAKPA-RL 303

Query: 304 KAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAILRL-LGSRGEIRFQGQHLQSMSQRQVR 362
            AV  ++F +  G+T+GIVGESGSGKST+   +L L   S GE  F G+ +  M ++Q+ 
Sbjct: 304 HAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRKQLL 363

Query: 363 PLRRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHRMGNAKEQ-EQAIIEALVEVGLDPET 421
             RR++Q+VFQDP+ S++PRM+V  IV E   IH+    K +    + E L  VGL+PE 
Sbjct: 364 AFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEH 423

Query: 422 RHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLT 481
             RYPH+FSGGQRQRIAIARAL   P L++ DE  SALD +VQ QV++LL  L+ +  L 
Sbjct: 424 AKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLA 483

Query: 482 YLFISHDLAVVRALSHQMMVVKQGQVVEQGAAADIFAAPQHPYTQQLLES 531
           Y+FI+HDL +VR  + +++V+K G++VE     +IF  PQH YT+QL+ +
Sbjct: 484 YIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINA 533



 Score =  208 bits (529), Expect = 5e-58
 Identities = 121/269 (44%), Positives = 170/269 (63%), Gaps = 13/269 (4%)

Query: 2   AEQPIAE--NLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHS 59
           A +PI E  N+ +   L+  F         V+ ++FD+  GET+ +VGESGSGKS  A  
Sbjct: 276 AGKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARV 335

Query: 60  ILRLLPYPLARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQ 119
           +L L          G+ LFHG+D+LK D K +   R  ++ MVFQ+P +S+NP  TV   
Sbjct: 336 LLGL-----NEASGGEALFHGRDVLKMDRKQLLAFR-RKVQMVFQDPYSSMNPRMTVFDI 389

Query: 120 INEVLEIHKGLRGKAATA-RTLELLELVGI-PEPRKRIRAYPHELSGGQRQRVVIAMALA 177
           ++E   IHK +  K     R  ELL LVG+ PE  KR   YPH+ SGGQRQR+ IA ALA
Sbjct: 390 VSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAKR---YPHQFSGGQRQRIAIARALA 446

Query: 178 NEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQR 237
            +PEL++ DE  +ALDV+VQ+++++LL EL+ RLG+A + I+HDL +VR  A R+ VM+ 
Sbjct: 447 CDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKS 506

Query: 238 GRVVEQALCEDLFRAPQHPYTQELLAAEP 266
           G +VE A  E++FR PQH YT++L+ A P
Sbjct: 507 GEIVEHATTEEIFRNPQHAYTRQLINATP 535