Pairwise Alignments

Query, 412 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 373 a.a., substrate-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 24/328 (7%)

Query: 5   SLAIALALLTALTAHAAEPIRIGLNYPSTGNYKSEGLELSRGALLAVDEINGRGGLLGRQ 64
           ++ IA+ LL       + PI +G + P TG     G++   GA LA++ IN  GG+ GRQ
Sbjct: 15  TVGIAVVLL-----RPSPPILVGFSGPLTGVNSDLGVQGRNGAQLAIEHINAGGGINGRQ 69

Query: 65  LQLVSLNSAARPEKAQANIERFANQGAAMVFGGANSEEALAAGQRARELG-LLYFPTLGY 123
           L+L+S++     E A+        QG   + G   S +A+A      + G ++  PT+  
Sbjct: 70  LELLSMDDGPTAESARDADSALLRQGVVAIIGHMTSNQAIAGLPVVEQHGAVMIAPTVST 129

Query: 124 ANEITGRDGHRHLFRESNSAWMSARVLGEY-LSWHMPNRRYHYVSLDDAWGRSMEQALRE 182
                 RDG   L  + N +W  A    +Y L+  +      Y + + A+  S       
Sbjct: 130 PLLTGKRDGFFRLMPD-NDSW--AYATADYALAQGLKTVSVIYETANQAFAGSFVDGF-- 184

Query: 183 ATKSRDRARHGYSKIAERGARRGDYLAALQKAAASNADVLVIVLLGEDLVQTMRLAHTLE 242
            T+          +I    A+R    AA  +A ++N D +V+     D   T  LA  ++
Sbjct: 185 VTQFEAGGGRLLQRIPFTSAQRDTLEAAAIRAVSTNPDTIVLAASARD---TAALAQFID 241

Query: 243 LGKRMQIIVPNLTQSIVEQ---AGPLVMEHVIGTEAWTWRVPKLVGSTEGQ-AFADRFIA 298
                + ++ + + +   +   AG   +E ++ T ++   +P    + EG  AF   +  
Sbjct: 242 AHDSPRPVLLSSSWAYTREIFLAGGRAVEGIVFTISY---LPD--DTREGYLAFRKAYTE 296

Query: 299 QHQAYPGSTAASAYGIVRQWADAAQRAG 326
           +    P   AA AY   +  A A +R G
Sbjct: 297 RFGWEPNFAAALAYESAKVLAAALRRTG 324