Pairwise Alignments

Query, 643 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 523 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  152 bits (385), Expect = 3e-41
 Identities = 88/184 (47%), Positives = 112/184 (60%), Gaps = 2/184 (1%)

Query: 442 RTRALEEVRQGLEAANAELTRLSTTDALTQLANRRRFDRLLDEEIRRARRSGSPLSVLLA 501
           + R  E +   L  A   L  ++T D+LT LANRR F+R LD E  R  R  SPLS+++ 
Sbjct: 323 QVRNSERIEADLRKAQEALELIATHDSLTGLANRRLFERALDVEFGRGARQRSPLSLIML 382

Query: 502 DIDHFKRVNDGYGHPFGDECLRQVAAVLAAHCQRAGDLAARYGGEEFVVLLPASDQRQAF 561
           DID FKR ND YGH  GD CL +VA VL   C R  DLA RYGGEEF VLLP ++   A 
Sbjct: 383 DIDFFKRYNDAYGHVAGDHCLAEVAKVLKDCCHRKADLAVRYGGEEFAVLLPDTNLSGAM 442

Query: 562 VLAERIRQN-IERLQLRYGDQAVALTISLGVATLGP-TVASAEALLATADAALYAAKHAG 619
            LAE+IR++ I++  +  G     LT+SLG     P ++ S E  +  ADAALY AK+ G
Sbjct: 443 ALAEQIRRSVIDKHIIHSGSPTGYLTVSLGCYAFVPSSLDSIEVFIQRADAALYQAKYNG 502

Query: 620 RNQV 623
           RN+V
Sbjct: 503 RNRV 506