Pairwise Alignments

Query, 643 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 394 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  135 bits (339), Expect = 4e-36
 Identities = 76/177 (42%), Positives = 109/177 (61%), Gaps = 5/177 (2%)

Query: 459 ELTRLSTTDALTQLANRRRFDRLLDEEIRRARRSGSPLSVLLADIDHFKRVNDGYGHPFG 518
           +  R++  D LT L+NRR FD +L  EI+ A R+G PLS++L D+D FKR+ND  GH  G
Sbjct: 209 QFKRMALIDGLTDLSNRRHFDEVLALEIKAAERTGDPLSMILLDVDFFKRLNDSLGHSDG 268

Query: 519 DECLRQVAAVLAAHCQRAGDLAARYGGEEFVVLLPASDQRQAFVLAERIRQNIERLQLRY 578
           D CL ++  VL     R  DLAARYGGEEF ++LP +D   A  +AE+IR  ++  ++ +
Sbjct: 269 DRCLVRLGEVLHGVASRPRDLAARYGGEEFAIILPDTDLSGARHIAEQIRYELKAAEIPH 328

Query: 579 GDQAVA--LTISLGVATLGPTVASAEALLATADAALYAAKHAGRNQVVCAPEAAIGE 633
            D  +   +T+S GV    P +  A+ LLA+AD  LY +K  GR++  C+   A GE
Sbjct: 329 PDSTLGAYVTVSQGVCLWQPGL-DADELLASADQLLYQSKAQGRDR--CSTGVAKGE 382