Pairwise Alignments

Query, 643 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 625 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  248 bits (633), Expect = 6e-70
 Identities = 178/571 (31%), Positives = 283/571 (49%), Gaps = 28/571 (4%)

Query: 63  QWQALTKPNLGK-QRDGAWLRFTLYNEGAEAKRWYLLLKWPVLDRVAVRLHYPDSDRWGQ 121
           QW   T  ++ +  +   WLR  L   G E+    L L  P+LDRV +  H  ++     
Sbjct: 62  QWHKFTSDDIQRLSQHDFWLRVNL-TSGDESLARILALDNPLLDRVTI-FHLVNNQLINT 119

Query: 122 PMLAGDALALSVRPLADHHFVYPLELPAGEPVVVYMQLQAREILALPLELIDDKQLIEGK 181
             + GD L    RPL  + F+YP +L + E    Y+ +      A+PL L     L +  
Sbjct: 120 TEM-GDTLLYKNRPLPSNIFLYPFKLSSNEQHTFYLHIVTEGSAAIPLSLWSANDLAQ-- 176

Query: 182 LRDVTLVSLFF--GGILVIVLYNCSLLIFTRDRSYFLYVLYLLSAVFYVLTITGFGQLYL 239
           + + T V   F  G +  I +++  + + +   SY  Y  Y+L     V TI G+   +L
Sbjct: 177 IAESTAVEHGFQLGVLAAIGIFSLFIALASGSFSYSYYSGYVLCMTLLVATINGYAFRFL 236

Query: 240 WPEIPELSARFYGLSAALCFFTPMLFALRFLGIRRYGGWVWAVSITLTCYWGLVALTI-- 297
           WP  P L      +   L     ++F  + L ++ Y        + L C +  V + +  
Sbjct: 237 WPNWPALQQLMVPVLLPLVMAFALMFTEKILQLKYYNR-----RMLLMCRYSAVYIILVG 291

Query: 298 LLAPTL----ARYLFMESVALLHCVLTMAVTLNLWARGNQSARLFSIAWSTLLGFTVINL 353
           LL P L      Y+ + SVA+L  ++ +   +     G + A+L++I W ++L    I+ 
Sbjct: 292 LLVPFLRYGTVLYIEIISVAILSIIMMILAIIQA-INGQKLAKLYTIGWVSMLTGACISS 350

Query: 354 LALNGTLPLNAWTLNGQLIGMFTEFVLLSMALAERINVERNRRIAAQQLALQASETLAEE 413
           L     +  N       ++G+  E + +S+ LA R N ER  ++  QQ AL+ ++ +   
Sbjct: 351 LLYLSVIEFNIKPQTPVMLGLTFEIIFMSLVLAIRYNDERKSKLRIQQEALKQAQKIRS- 409

Query: 414 RALHLQAKQEALDLQLHTNEVLEARVYERTRALEEVRQGLEAANAELTRLSTTDALTQLA 473
                 A++EAL ++  TNE LE  V ERT  LE   + L   N +LT  ST D+LT + 
Sbjct: 410 ------AREEALKVEAETNERLEQMVQERTLELEITLRELHEVNQKLTEQSTIDSLTGVK 463

Query: 474 NRRRFDRLLDEEIRRARRSGSPLSVLLADIDHFKRVNDGYGHPFGDECLRQVAAVLAAHC 533
           NR  FD+ L  E R +RR  +P+++L+ DID FK +ND +GH  GD+ L+ +A  L  H 
Sbjct: 464 NRSAFDKRLLAESRISRRQETPIALLMLDIDRFKSINDQFGHLAGDQALKVIATTLQQHL 523

Query: 534 QRAGDLAARYGGEEFVVLLPASDQRQAFVLAERIRQNIERLQLRYGDQAVALTISLGV-A 592
           +R  DL +R+GGEEF ++LP +    A  +AE IR  +  + L +  + + LT+S+GV A
Sbjct: 524 KRPTDLVSRFGGEEFAIILPNTTAEGAIQVAESIRDAVTSIGLAWEGKPIPLTVSIGVSA 583

Query: 593 TLGPTVASAEALLATADAALYAAKHAGRNQV 623
            +      +  LL  AD ALY AK++GRNQV
Sbjct: 584 DVISNDQHSTELLEQADKALYQAKNSGRNQV 614