Pairwise Alignments

Query, 766 a.a., Outer membrane receptor proteins, mostly Fe transport from Pseudomonas stutzeri RCH2

Subject, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

 Score = 62.0 bits (149), Expect = 1e-13
 Identities = 131/606 (21%), Positives = 232/606 (38%), Gaps = 82/606 (13%)

Query: 16  LSLAIAALLPASVHAAQRLDLGSQEVIGTTPLPGIELPKEQVPSNIQSLDDEDLRRLGGQ 75
           +S A+ ++L A    A+      +EV+ T     IE P  +V  ++  L+ E L + G  
Sbjct: 6   VSAAVLSVLAAGFAHAETEPSHYEEVVVTANR--IEQPLSEVAGSVAVLEGETLEKQGKT 63

Query: 76  SLAEKLQRGLPSVNINEIQGNPYQADLNYRGFTASPLLGTPQGLSVFLDGVRVNEAFG-- 133
            L + L +  P V++    G P   ++  RG T + +       ++  DG++  + +G  
Sbjct: 64  ELYDALNQE-PGVSVTGGAGRPQ--NITIRGMTGNRI-------AIVRDGIQSADGYGAA 113

Query: 134 ---DVVHWDLIPNTAIANMALVPG-SNPLYGLNTLGGALALQTKRGDTHPG------GSA 183
              D    +    + +  + +V G S+ LYG   +GG + +++K  + +         +A
Sbjct: 114 DINDKYGRNTFSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAPEDYLYHRDYYVDAA 173

Query: 184 EIYGGSFGRQGGAIEQGGSHEEFSWYLAAEGMDEDGWRDHSPSEVRQL-------FGKFA 236
             Y G   R  G       H +    L  +    +  R+ +     +        F    
Sbjct: 174 LTYSGISNRYQGNHALAMRHGDGEALLTIDYWQGEETRNFNQDLYNREVDGYNLGFSHHY 233

Query: 237 WTTDSTDLALTLAHADNDLIGNGLIPESMYDQRRESIFTYPDQTENRSHLMALSASHWLN 296
           W  D+  L   L + D D         S+    +  + ++ +   +++ L ++ A +  N
Sbjct: 234 WLNDALRLKTHLEYFD-DYAKRREGTSSIQKDDKWDLVSFYEYQRSQTRLASVGADYTAN 292

Query: 297 DN--DRLFATVYLRRTRTATL---------NGDGNDEYEDEYEAWEDGGFIGEGPESGVL 345
            +  D L    Y R T   T          +G G   Y  E     D GF  E      L
Sbjct: 293 LSWMDTLEGKFYWRSTENITQTNRLMANDRSGAGILSYRRELR---DEGFNDEA-----L 344

Query: 346 NRTRTAQRAYGLALQWARHVGAHQFAFGLS---HDNTR-ASFHQSEQGGELTDSRGIAAS 401
             T  AQ+      +W +    HQFA+G+S   HD  R  S  + E  G+      + A 
Sbjct: 345 GATLNAQK------EWQQGEWLHQFAYGMSVDGHDYQRPKSIRRMESSGD-----DLQAD 393

Query: 402 EAEEQANSLLGRTRTSSLYATDTWALTDALQLTGSLRYNRTRV--VNTDRMGDALNGDFT 459
           E    A     R     +Y  D   L D   L   LR++  ++   NTDR+         
Sbjct: 394 EPFAPA-----REYRFGVYGQDNLLLGD-WTLAAGLRFDAQKLSPKNTDRIHGYKVVTMG 447

Query: 460 YRKLNPALGFAWQLQPALTVYGGFSQGNRAPT-PIELGCADPANPCSLPNAMAADPFLEQ 518
             + +P+   ++Q  P    Y  ++ G RAP+     G +D +     P  +  +  L  
Sbjct: 448 SSEWSPSASISYQWHPEWNTYLSYNHGFRAPSYDKAYGASDHSFVPLTPFIIKPNNKLRA 507

Query: 519 VVTRTLEFGVRGELAGGTRWNLGAFRSV--NHDDLLFVG----TGGSMGYFTNFGRTRRQ 572
             + + E G + +  G T++ +  F S+  N  D+  VG    TG  +  + N    +  
Sbjct: 508 ETSDSFELGSKYD-NGQTQFYVAVFYSIFDNFIDVKQVGYDNATGSVIQQYQNIAGVKTY 566

Query: 573 GIEMGL 578
           G EM +
Sbjct: 567 GAEMSV 572