Pairwise Alignments

Query, 526 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 493 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  230 bits (587), Expect = 8e-65
 Identities = 149/376 (39%), Positives = 217/376 (57%), Gaps = 6/376 (1%)

Query: 147 GLRERLALLAAAGAAGGVVVGTVLAASPIAATLAGLALGGAAAVAAATALLPLSRLAR-- 204
           G  +RLA+LA  G +   V G   +    A  +  LA+ GA+ +     L  L+ L    
Sbjct: 118 GESQRLAVLAQ-GVSLSQVFGERFSQYAAAVFVLMLAMLGASQLLIRFLLSQLNTLKDVM 176

Query: 205 -QARQVGDNPVSQLIYTGRRDEIGQIEFAMKMLETEAGAMVGRIADSSRQLSDHARDLLG 263
               + GD  +S  +     DE+GQ+  A   ++     +V  +A ++RQL   A  L  
Sbjct: 177 LHVEKTGD--LSARVPLACEDEVGQMAAAFNAMQAGYQRVVDTVASTARQLDSGAARLAS 234

Query: 264 AMHGSTQSAARQQQETDLIATAIQQMSASVQEVALNAQRTAEVAARADSEAAKGREVVGR 323
           +M+        QQ ETD  ATAI +MSA+V  +A +A  T +++  AD+ A  G +VV R
Sbjct: 235 SMNDVRHGMLGQQSETDQAATAINEMSATVYHIAQHAGATRDLSKTADTLAGNGHDVVAR 294

Query: 324 TGSSITRLAADIQQAAEVIHQLENHSQEISRVLDVIHGIAEQTNLLALNAAIEAARAGEQ 383
              SIT L++ +QQ AE+I +L   SQ+I+ V+ VIH IAEQTNLLALNAAIEAARAGE 
Sbjct: 295 VQQSITGLSSGVQQTAEMIQRLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEM 354

Query: 384 GRGFAVVADEVRQLASRTSLATTDIQRMIGSLQTGAREAVDVMQRSREQAEHSVSHADQA 443
           GRGFAVVADEVR LA R   +T +I  M+ +LQ G R+AVD MQ S  +A+  V  A +A
Sbjct: 355 GRGFAVVADEVRNLAKRVQTSTDEITTMVSALQAGTRDAVDFMQESSLKADDCVQQAREA 414

Query: 444 EHSLSGINSRVNEISAMSSQIAAAVDQQSSVGEEISQSIVSIRGSSDEHVASGLHSQRNA 503
             +L+ I + V ++   ++QIA A +QQS V EE+++++VSIR  ++  V   + S   +
Sbjct: 415 GDALAQITAAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVRQTVDSATTS 474

Query: 504 TGVALLADGMLELVQQ 519
             +A LA  + + + Q
Sbjct: 475 HELATLAGELSKAIGQ 490