Pairwise Alignments

Query, 526 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (531), Expect = 3e-58
 Identities = 127/324 (39%), Positives = 191/324 (58%), Gaps = 2/324 (0%)

Query: 199 LSRLARQARQV--GDNPVSQLIYTGRRDEIGQIEFAMKMLETEAGAMVGRIADSSRQLSD 256
           L R+++   ++  GD  ++Q +     DE+GQ+        +    MV +++  S  L+ 
Sbjct: 306 LGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQ 365

Query: 257 HARDLLGAMHGSTQSAARQQQETDLIATAIQQMSASVQEVALNAQRTAEVAARADSEAAK 316
            ++         +     QQ E +++ATAI +M+A+ QE+A NA  TA+ A  A +    
Sbjct: 366 QSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAVTACVH 425

Query: 317 GREVVGRTGSSITRLAADIQQAAEVIHQLENHSQEISRVLDVIHGIAEQTNLLALNAAIE 376
           G   V +T  SI  LA ++Q A EVI +LE H  +IS +L  I  IAEQTNLLALNAAIE
Sbjct: 426 GAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIE 485

Query: 377 AARAGEQGRGFAVVADEVRQLASRTSLATTDIQRMIGSLQTGAREAVDVMQRSREQAEHS 436
           AARAGEQGRGFAVVADEVR L+ RT  +T +IQ+MI +LQ    +AV +M  SR  A+ S
Sbjct: 486 AARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSRRLADTS 545

Query: 437 VSHADQAEHSLSGINSRVNEISAMSSQIAAAVDQQSSVGEEISQSIVSIRGSSDEHVASG 496
           V  A++A  SL  I+  V  IS M++QIA+A ++Q+SV  EI+++ V IR  S++     
Sbjct: 546 VDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSNDLAQEA 605

Query: 497 LHSQRNATGVALLADGMLELVQQF 520
             +   A  ++ L+  + + +++F
Sbjct: 606 HSAAEQAAELSELSHELEQEIRRF 629