Pairwise Alignments

Query, 482 a.a., chromosomal replication initiator protein DnaA from Pseudomonas stutzeri RCH2

Subject, 463 a.a., chromosomal replication initiator protein DnaA from Rahnella sp. WP5

 Score =  629 bits (1622), Expect = 0.0
 Identities = 325/483 (67%), Positives = 380/483 (78%), Gaps = 21/483 (4%)

Query: 1   MSVELWQQCVELLRDELPAQQFNTWIRPLQVEGDGEELRVYAPNRFVLDWVNEKYLSRLL 60
           MS+ LWQQC+  L+DELPA +F+ WIRPLQ E +   L +YAPNRFVLDWV +KYL+ + 
Sbjct: 1   MSLSLWQQCLARLQDELPATEFSMWIRPLQAELNDNTLALYAPNRFVLDWVRDKYLNNIN 60

Query: 61  ELLSERSSGLAPALSLLIGSKRTSSAALPSAAAARAQPQPTVVSTPAPAAPSPARFEPLS 120
            LL++     AP L   +GSK             +   QP   S  + AAP+  R  P  
Sbjct: 61  GLLNDFCGTDAPLLRFEVGSK----------PVIQRVSQPVAASVSSQAAPAIPRLAPSR 110

Query: 121 AD-TSEPEQPRVERNVQVEGGLKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPKHG 179
               S P QP           L + S +N   TF+NFVEGKSNQLARAAA QVADNP   
Sbjct: 111 PSWDSSPAQPE----------LSYRSNVNPKHTFDNFVEGKSNQLARAAARQVADNPGGA 160

Query: 180 YNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKR 239
           YNPLFLYGG GLGKTHL+HAVGN ++ +  NAKVVY+HSERFV DMVKALQ NAI EFKR
Sbjct: 161 YNPLFLYGGTGLGKTHLLHAVGNGIMARKANAKVVYMHSERFVQDMVKALQNNAIEEFKR 220

Query: 240 FYRSVDALLIDDIQFFAKKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIDGLEERLKS 299
           +YRSVDALLIDDIQFFA KERSQEEFFHTFNALLEG QQ+ILTSDRYPKEI+G+E+RLKS
Sbjct: 221 YYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKS 280

Query: 300 RFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAFFIAQRIRSNVRELEGALKRVI 359
           RFGWGLTVA+EPPELETRVAILMKKAD+  + LP + AFFIA+R+RSNVRELEGAL RVI
Sbjct: 281 RFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVI 340

Query: 360 AHAHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVA 419
           A+A+F GR ITI+ +RE+L+DLLALQ+KLV++DNIQ+TVAEYYKIK++DLLSKRRSRSVA
Sbjct: 341 ANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVA 400

Query: 420 RPRQVAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIAELRETDADIREDYKNLLRT 479
           RPRQ+AMAL+KELTNHSLPEIGDAFGGRDHTTVLHACRKI +LRE   DI+ED+ NL+RT
Sbjct: 401 RPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRT 460

Query: 480 LTT 482
           L++
Sbjct: 461 LSS 463