Pairwise Alignments

Query, 263 a.a., alcohol ABC transporter, permease protein from Pseudomonas stutzeri RCH2

Subject, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 10/193 (5%)

Query: 66  IVPGLACMILLFNGMQ-GSLSMVYDREMGSMRVLLTSPLPRSFLLASKLVAIALISLLQV 124
           IVPGL  +IL    +   S ++V +RE G++ +L+T+P+    L+  K+V    + L+QV
Sbjct: 172 IVPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQV 231

Query: 125 YAFLAIAWFYGVQPPLLGLLVALPALLLVALLLSALGLLLSNGIRQLENFAGVMNFVIFP 184
              L +  F    P    L   L   LL       LGL++S           +  F++ P
Sbjct: 232 AIILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLP 291

Query: 185 MFFLSSALYPLWKMRDASEWLYWLCAINPFTHAVELVRNALYLRLAPAALV----VCLGL 240
              LS  ++P   M  A++WL  L    P TH + L+R  + LR A  A +    + L L
Sbjct: 292 SILLSGFMFPYEGMPTAAQWLSELL---PATHFMRLIR-GIVLRGADLADLWRDTLWLAL 347

Query: 241 TLLFSL-LAVISF 252
             LF L LA + F
Sbjct: 348 FTLFGLMLAALRF 360