Pairwise Alignments

Query, 441 a.a., ATPase related to the helicase subunit of the Holliday junction resolvase from Pseudomonas stutzeri RCH2

Subject, 411 a.a., ATPase, AAA family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  292 bits (748), Expect = 1e-83
 Identities = 176/433 (40%), Positives = 249/433 (57%), Gaps = 25/433 (5%)

Query: 9   VSQPLAARLRAASLDEYVGQEHLLARGKPLREALEQGALHSMVFWGPPGVGKTTLARLLA 68
           V QPL  RLR   L+ +VGQ HL  R + L   L    L S++ +GPPG GK+TLA LLA
Sbjct: 3   VRQPLPERLRPTVLEGFVGQTHLTQRIEAL---LRANRLPSLLLFGPPGCGKSTLALLLA 59

Query: 69  KVSDAHFETVSAVLAGVKEIRQAVEIAKQQAAQYGRRTILFVDEVHRFNKSQQDAFLPYV 128
           K   A+   +SA  AG++ +R+          Q     IL +DE+HRF+K+QQD FLP +
Sbjct: 60  KARSANVLRLSAPEAGLQHLRK----------QLHGVDILVLDELHRFSKAQQDFFLPLL 109

Query: 129 EDGTLIFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVARALSEPKGLGDLQLE 188
           E G +  +  TTENPSF +   LLSR  V  L+ L  A L +L  R      G    +++
Sbjct: 110 ESGDITMLATTTENPSFSVTRQLLSRLHVLRLRPLGRAELLELGRR------GAVAQEVQ 163

Query: 189 LPEESFQMLLAAADGDGRRLLNLLENASDLAEQGGTISTDLLQDLLGDSRRRFDKGGEAF 248
           + ++   +L + + GD R +LNLLE  + L E    I    ++  + +   R DK G+  
Sbjct: 164 IEDDVLDLLASMSHGDARTMLNLLEYVAALPEDKRDIEG--VRSAMPEIVSRHDKDGDNH 221

Query: 249 YDQISALHKSVRGSNPDAALYWFARMLDGGCDPLYLARRVVRMASEEIGNADPRALPLCL 308
           Y+  SAL KS+RGS+PDAALY+ A +L+GG DP ++ RR++  ASE++G ADP+ALPL +
Sbjct: 222 YELASALIKSIRGSDPDAALYYLACLLEGGEDPRFVCRRLILSASEDVGLADPQALPLAV 281

Query: 309 NAWDVQERLGSPEGELAVAQAIVYLACAPKSNAVYTAFKAAMRDAAENGSQEVPLHLRNA 368
                 E +G PEG + +AQ  V+LA A KSN+ Y A+  A R+    G + VPLHLRN 
Sbjct: 282 ACMQAVEYVGMPEGFIPMAQTTVHLALARKSNSTYAAYINAARELKTQGRKGVPLHLRNP 341

Query: 369 PTKLMKELGYGNEYRYAHDEPDAYAAGEDYFPEAMEPRRYYHPAPRGLESKIRDKLEHLA 428
            T+L KE GYG  YRY H  P+ +   ++Y PE +E RR+Y P   G E ++        
Sbjct: 342 STRLQKEWGYGKGYRYPHSYPEGWIE-QEYLPEGLEDRRFYAPRENGEEPRLS---AWWR 397

Query: 429 RLDRESPIQRRKG 441
           +L R+ P +R  G
Sbjct: 398 KLQRQRPPRRGSG 410