Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit clpA from Pseudomonas stutzeri RCH2

Subject, 816 a.a., ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  768 bits (1984), Expect = 0.0
 Identities = 399/747 (53%), Positives = 529/747 (70%), Gaps = 13/747 (1%)

Query: 1   MLNRELEVTLNLAFKEARTKRHEFMTVEHLLLALLDNEAAATVLRACGASLDKLRHDLQE 60
           M+ R LE  L  A  + RT+ HEF+T+EHLL A+   +A   +L A G  +  LR  L+ 
Sbjct: 1   MIGRRLEAALTAAVNDVRTRNHEFLTLEHLLYAITGEDAGKHILEAVGVDVKSLRLRLET 60

Query: 61  FIDSTTPLIPQHDEERETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA 120
           F  +    +P  D   E   TLG QRVLQRA+ H+QS+GK  V   +VL AIF E ++ A
Sbjct: 61  FFATHLEPLPA-DTPTEVVQTLGVQRVLQRAIRHMQSAGKGAVEIGDVLAAIFEEDDAYA 119

Query: 121 VFLLKQQNVARIDVVNYIAHGISKVPGNAGSPESDAEMQDEDGGESGASSNPLDAYASNL 180
            + LK Q V R+DV+ +I+HG  +     G  +   + + EDG       + L+ +  +L
Sbjct: 120 TYFLKSQGVTRLDVLQHISHGAPQ----GGDVDGGDDAEGEDGAPDTPRIDALEKFTVDL 175

Query: 181 NELARQGRIDPLVGRENEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDNQV 240
              AR GRIDPL+GR  E+ER  Q+LARRRKNNPL VG+ GVGKTAIAEGLA R+    V
Sbjct: 176 TARARDGRIDPLIGRVKELERTIQVLARRRKNNPLYVGDPGVGKTAIAEGLALRVAGGDV 235

Query: 241 PDLLADSVVYSLDLGALLAGTKYRGDFEKRFKALLGELRKRPHAILFIDEIHTIIGAGAA 300
           P+   D  +++LD+GALLAGTKYRGDFE+R K ++ +L K P AILFIDEIHTI+GAG+ 
Sbjct: 236 PEEFRDVRIFALDMGALLAGTKYRGDFEQRLKGVITDLGKVPGAILFIDEIHTIVGAGST 295

Query: 301 SGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVEDTIG 360
           SGG MDASN+LKP+L+ G IRCIGSTT++E+R  FEKDRAL+RRFQK+DV EPS ++ + 
Sbjct: 296 SGGSMDASNILKPVLADGSIRCIGSTTYEEYRNHFEKDRALSRRFQKIDVQEPSQDECVD 355

Query: 361 ILRGLKGRFEQHHHIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEDQ 420
           IL+GL+  +E HH + Y+  ALRAA EL++RYI +R +PDKAIDV+DEAGA  RL+   +
Sbjct: 356 ILKGLRPYYEDHHKVRYTLPALRAAVELSARYITERLLPDKAIDVLDEAGAAARLRRGAR 415

Query: 421 RVKCID----VEQVEDIVAKIARIPPKHVSSSDKELLRNLERDLKLTVFGQDDAIDSLAT 476
                D    V++VE +VA++A+IP + VSSSD++ LR L+ DL+  VFGQD A+  L+ 
Sbjct: 416 AASASDAAIGVKEVEKVVARMAQIPSRTVSSSDRDRLRTLDEDLRNVVFGQDAAVGILSR 475

Query: 477 AIKLSRAGLKAPDKPVGSFLFAGPTGVGKTEAARQLARALGVELIRFDMSEYMERHTVSR 536
           AI  +RAGL   D+P GSFLF GPTGVGKTE AR+LA  +G+  +R+DMSEYME+H+VSR
Sbjct: 476 AILRARAGLGREDRPTGSFLFYGPTGVGKTELARRLAEVMGIGFLRYDMSEYMEKHSVSR 535

Query: 537 LIGAPPGYVGFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGR 596
           LIGAPPGYVGFDQGGLLTEAI KQP+ VLLLDEIEKAHP++FN+LLQVMD+ TLTDN GR
Sbjct: 536 LIGAPPGYVGFDQGGLLTEAIRKQPYTVLLLDEIEKAHPDIFNILLQVMDYATLTDNTGR 595

Query: 597 KADFRNVIIIMTTNAGAETAARASIGF---TLQDHASDAMEVIKKSFTPEFRNRLDTIIQ 653
           KADFRNV++IMT+NAG    +  +IGF     +D A    + ++  F+PEFRNRLD +I 
Sbjct: 596 KADFRNVVLIMTSNAGVREMSAPAIGFGATAQEDMAGKGRKAVENMFSPEFRNRLDAMIP 655

Query: 654 FGRLSHEVIKSIVDKFLIELQAQLEDKHVTLEVSDAARGWLAEHGYDAQMGARPMARLIQ 713
           F  L+  V++ IVDKF++EL + L+D+ V LE++ AAR  LAE G++   GARP+ R+I+
Sbjct: 656 FAGLTTPVMERIVDKFVLELGSGLKDRRVRLELTPAARARLAEKGFEPAFGARPLRRVIR 715

Query: 714 DKIKRPLAEEILFGELAEHGGVVHIDI 740
             ++  LA E+LFG+L + GG   +D+
Sbjct: 716 TALEDELAREVLFGKLRK-GGTAIVDV 741