Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit clpA from Pseudomonas stutzeri RCH2

Subject, 755 a.a., ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1017 bits (2629), Expect = 0.0
 Identities = 508/744 (68%), Positives = 616/744 (82%), Gaps = 4/744 (0%)

Query: 1   MLNRELEVTLNLAFKEARTKRHEFMTVEHLLLALLDNEAAATVLRACGASLDKLRHDLQE 60
           MLN++LEVTLNLAF++AR  RHE+MTVEHLLLAL+DN AA   L ACGA+LDKLR ++  
Sbjct: 1   MLNKDLEVTLNLAFQQAREARHEYMTVEHLLLALIDNPAAQEALIACGANLDKLRDEVAS 60

Query: 61  FIDSTTPLIPQHDEERETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA 120
           FI  TTP+I   D+++ETQPTLGFQRVLQRAVFHVQSSG+ EVTGANVLVAIFSEQESQA
Sbjct: 61  FIQQTTPIIADMDDDKETQPTLGFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120

Query: 121 VFLLKQQNVARIDVVNYIAHGISKVPGNAGSPESDAEMQDEDGGESGASSNPLDAYASNL 180
           V+LL++ +++R+DVVN+I+HG SK   N  S     + + E+  E+    + L  +A+NL
Sbjct: 121 VYLLRRSDISRLDVVNFISHGFSK---NEDSDAHQDQERSEEQAEASEERSMLSQFATNL 177

Query: 181 NELARQGRIDPLVGRENEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDNQV 240
           N+LA+QG IDPL+GR+ E+ER  Q L RRRKNNPLLVGEAGVGKTAIAEGLA RIV++QV
Sbjct: 178 NQLAKQGVIDPLIGRDQEIERAIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAYRIVNHQV 237

Query: 241 PDLLADSVVYSLDLGALLAGTKYRGDFEKRFKALLGELRKRPHAILFIDEIHTIIGAGAA 300
           P+++A + VYSLDLG+LLAGTKYRGDFEKRFK LL EL    HAILFIDEIHTIIGAGAA
Sbjct: 238 PEVMAQATVYSLDLGSLLAGTKYRGDFEKRFKNLLKELSADKHAILFIDEIHTIIGAGAA 297

Query: 301 SGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVEDTIG 360
           SGGVMDASNLLKPLLSSG +RC+GSTTFQE++ IFEKDRALARRFQKVD++EPSV +T  
Sbjct: 298 SGGVMDASNLLKPLLSSGNLRCMGSTTFQEYQSIFEKDRALARRFQKVDINEPSVAETTK 357

Query: 361 ILRGLKGRFEQHHHIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEDQ 420
           IL GLK ++E++H + Y+  A+ +AA L++++INDRH+PDKAIDVIDEAGA   + P+ +
Sbjct: 358 ILMGLKSKYEEYHGVRYTQAAINSAAVLSAKHINDRHLPDKAIDVIDEAGARMAMLPQSK 417

Query: 421 RVKCIDVEQVEDIVAKIARIPPKHVSSSDKELLRNLERDLKLTVFGQDDAIDSLATAIKL 480
           R K I   ++E IVAKIARIP K VS++DK+LLRNLER+LK+ VFGQD AI++L++AI+L
Sbjct: 418 RKKTIGQAEIETIVAKIARIPEKSVSATDKDLLRNLERNLKMVVFGQDKAIETLSSAIRL 477

Query: 481 SRAGLKAPDKPVGSFLFAGPTGVGKTEAARQLARALGVELIRFDMSEYMERHTVSRLIGA 540
           SR+GL    KPVGSFLFAGPTGVGKTE   QLA  LG++L+RFDMSEYME HTVSRLIGA
Sbjct: 478 SRSGLGTDKKPVGSFLFAGPTGVGKTEVTNQLANCLGMKLVRFDMSEYMESHTVSRLIGA 537

Query: 541 PPGYVGFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKADF 600
           PPGYVG+DQGGLLT+A+ K PHCV+LLDEIEKAHP+V+NLLLQVMDHGTLTDNNGRKADF
Sbjct: 538 PPGYVGYDQGGLLTDAVIKNPHCVVLLDEIEKAHPDVYNLLLQVMDHGTLTDNNGRKADF 597

Query: 601 RNVIIIMTTNAGAETAARASIGFTLQDHASDAMEVIKKSFTPEFRNRLDTIIQFGRLSHE 660
           R+V ++MTTNAG +   R SIGFT QDH  DA+  I + F+PEFRNRLD+II F  L   
Sbjct: 598 RHVTLVMTTNAGVQETIRKSIGFTQQDHTQDALSEINRVFSPEFRNRLDSIIWFNHLDMT 657

Query: 661 VIKSIVDKFLIELQAQLEDKHVTLEVSDAARGWLAEHGYDAQMGARPMARLIQDKIKRPL 720
           +I  +VDKFL+ELQAQL+ KHV LEVSD AR  LA+ GYD  MGARPMAR++ + IKRPL
Sbjct: 658 IIAKVVDKFLVELQAQLDAKHVVLEVSDEARTLLAQKGYDKSMGARPMARVVTELIKRPL 717

Query: 721 AEEILFGELAEHGGVVHIDIRDGE 744
           A+E+LFGEL EHGG+ H+D +DGE
Sbjct: 718 ADELLFGEL-EHGGIAHVDAKDGE 740