Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit clpA from Pseudomonas stutzeri RCH2

Subject, 775 a.a., ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  896 bits (2316), Expect = 0.0
 Identities = 443/747 (59%), Positives = 579/747 (77%), Gaps = 11/747 (1%)

Query: 6   LEVTLNLAFKEARTKRHEFMTVEHLLLALLDNEAAATVLRACGASLDKLRHDLQEFIDST 65
           LE  ++ A  +A  +RHE  T+EHLLLAL+D   AA V++AC   LD LR  L+ FI+  
Sbjct: 8   LEQAIHTALAQANARRHELATLEHLLLALIDEPDAAKVMKACNVDLDALRQTLEAFIEED 67

Query: 66  TPLIPQHDEERETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQAVFLLK 125
              +    E  E  PT  FQRV+QRA  HVQSSG++EVTGANVLVAIF+E+ES A + L+
Sbjct: 68  LATLATDVEGSEAVPTAAFQRVIQRAAIHVQSSGRQEVTGANVLVAIFAERESNAAYFLQ 127

Query: 126 QQNVARIDVVNYIAHGISKVPG--------NAGSPESDAEMQDEDGGESGASSNPLDAYA 177
           +Q++ R D VN+IAHG++K P          A   E +A    + GG+   S+  L  Y 
Sbjct: 128 EQDMTRYDAVNFIAHGVAKNPSFGESRPVSGASDMEEEASASTDQGGDEKESA--LAKYC 185

Query: 178 SNLNELARQGRIDPLVGRENEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVD 237
            +LN  +R+G +DPL+GR++EVER  Q+L RRRKNNPLLVG+ GVGKTAIAEGLA++IV 
Sbjct: 186 VDLNAKSRKGDVDPLIGRDSEVERCIQVLCRRRKNNPLLVGDPGVGKTAIAEGLARKIVQ 245

Query: 238 NQVPDLLADSVVYSLDLGALLAGTKYRGDFEKRFKALLGELRKRPHAILFIDEIHTIIGA 297
            + P++L  + +YSLD+GALLAGT+YRGDFE+R KA++ EL   P A+LFIDEIHT+IGA
Sbjct: 246 GETPEVLRGATIYSLDMGALLAGTRYRGDFEERLKAVVTELEDHPDAVLFIDEIHTVIGA 305

Query: 298 GAASGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVED 357
           GA SGG MDASNLLKP L  G++RC+GSTT++EFR  FEKDRAL+RRFQK+DV+EPSVED
Sbjct: 306 GATSGGAMDASNLLKPALQGGKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVTEPSVED 365

Query: 358 TIGILRGLKGRFEQHHHIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQP 417
           T+ IL+GLK  FE HH I+Y+ +A++ A EL++RYINDR +PDKAIDVIDEAGA Q L  
Sbjct: 366 TVKILKGLKPYFEDHHAIKYTSDAIKTAVELSARYINDRKLPDKAIDVIDEAGAAQHLVA 425

Query: 418 EDQRVKCIDVEQVEDIVAKIARIPPKHVSSSDKELLRNLERDLKLTVFGQDDAIDSLATA 477
           E +R K I  +++E +VAKIARIPPK+VS  D E+L++LE  LK  VFGQD+AI++L++A
Sbjct: 426 ESKRRKTIGAKEIEAVVAKIARIPPKNVSKDDAEVLKDLEVSLKRVVFGQDNAIEALSSA 485

Query: 478 IKLSRAGLKAPDKPVGSFLFAGPTGVGKTEAARQLARALGVELIRFDMSEYMERHTVSRL 537
           IKL+RAGL+ P+KP+G++LFAGPTGVGKTE A+QL+  LGVEL+RFDMSEYME+H VSRL
Sbjct: 486 IKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQLSSTLGVELLRFDMSEYMEKHAVSRL 545

Query: 538 IGAPPGYVGFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRK 597
           IGAPPGYVGFDQGGLLT+ + + PHCVLLLDEIEKAHP+V+N+LLQVMDHGTLTD+NGR 
Sbjct: 546 IGAPPGYVGFDQGGLLTDGVDQHPHCVLLLDEIEKAHPDVYNILLQVMDHGTLTDHNGRT 605

Query: 598 ADFRNVIIIMTTNAGAETAARASIGFTLQDHASDAMEVIKKSFTPEFRNRLDTIIQFGRL 657
            DFRNVI+IMT+NAGA   A+A+IGF       +    I+++FTPEFRNRLD +I F  L
Sbjct: 606 VDFRNVILIMTSNAGAAEQAKAAIGFGRDRREGEDTAAIERTFTPEFRNRLDAVISFAPL 665

Query: 658 SHEVIKSIVDKFLIELQAQLEDKHVTLEVSDAARGWLAEHGYDAQMGARPMARLIQDKIK 717
             E+I  +V+KF+++L+AQL D++VT+E+S+ A   L + GYD +MGARP+ R+IQ++IK
Sbjct: 666 GKEIIMQVVEKFVLQLEAQLLDRNVTIELSEEAATLLGDMGYDDKMGARPLGRVIQEQIK 725

Query: 718 RPLAEEILFGELAEHGGVVHIDIRDGE 744
           +PLAEE+LFG+LA+ GG+V + ++DG+
Sbjct: 726 KPLAEELLFGKLAK-GGIVKVGVKDGK 751