Pairwise Alignments

Query, 375 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Pseudomonas stutzeri RCH2

Subject, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

 Score =  501 bits (1289), Expect = e-146
 Identities = 243/364 (66%), Positives = 296/364 (81%), Gaps = 4/364 (1%)

Query: 7   TAPEKTRVIVGMSGGVDSSVSALLLLEQGYQVEGLFMKNWEEDDGTEYCTAKEDLADAQA 66
           +A  + +VIVGMSGGVDSSVSA LL +QGYQVEGLFMKNWEEDD  EYCTA EDLADAQA
Sbjct: 7   SANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQA 66

Query: 67  VCDRIGIKLHTANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNREIKFKAFLDYA-LMLG 125
           VCD++GI LHT NFAAEYWDNVFE+FLAEYKAGRTPNPDILCN+EIKFKAFL++A  +L 
Sbjct: 67  VCDKLGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLD 126

Query: 126 ADLIATGHYVRRR--DRDGRSELLKGLDPNKDQSYFLHAVGGEQLGKTLFPVGELEKPAV 183
           AD IA GHYVRR       + ++L+GLD NKDQSYFL+ +  EQ+ +TLFPVGELEKP V
Sbjct: 127 ADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEV 186

Query: 184 RAIAEKYDLATAKKKDSTGICFIGERRFSDFLKQYLPAQPGNIETVDGEVIGRHHGLMYH 243
           R IAE+  L TAKKKDSTGICFIGER+F+DFL +YLPAQPG IET +G+VIG H GLMYH
Sbjct: 187 RRIAEEQGLITAKKKDSTGICFIGERKFTDFLSRYLPAQPGKIETPEGKVIGEHQGLMYH 246

Query: 244 TIGQRQGLGIGGLKDASDEPWYVLSKDLQRNALVVGQGNDHPWLFSRALLASEIYWVNPI 303
           T+GQR+GL IGG+K++S++PWYV  KDL+RN L+  QG DHP L S  L+A++++WV+  
Sbjct: 247 TLGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLHWVDRT 306

Query: 304 DLSTPLKLTAKVRYRQSDQACTLEKTAEG-YRAVFEAPQRAVTPGQSVVFYDGEICLGGG 362
            ++ P++ + K RYRQSD ACT+   ++   + +F+ PQ AVTPGQS VFY GEICLGGG
Sbjct: 307 PITEPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGEICLGGG 366

Query: 363 VIEQ 366
           +IE+
Sbjct: 367 IIEE 370