Pairwise Alignments

Query, 850 a.a., TRAP transporter, 4TM/12TM fusion protein from Pseudomonas stutzeri RCH2

Subject, 488 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score = 65.9 bits (159), Expect = 5e-15
 Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 9/228 (3%)

Query: 187 EGVFGIALGVSTSFVFLFVLFGALLERAGAGHYFIQLAFSMLGHFRGGPAKAAVVASGMT 246
           E VFGI    +   +  F   G +LER+G     +     + G  RGG A A +    + 
Sbjct: 57  ERVFGIMANDTLLAIPFFTFMGLVLERSGMAEDLLDTIGQLFGPMRGGLAYAVIFVGALL 116

Query: 247 GLISGSSIANVVTTGTFTIPMMKRTGFSAEKAGAVEVASSVNGQIMPPVMGAAAFLMVEY 306
              +G   A+V++ G  ++P+M R G+    A  V  AS    QI+PP +     +M + 
Sbjct: 117 AATTGVVAASVISMGLISLPIMLRYGYDKRLASGVIAASGTLAQIIPPSL--VLIIMADQ 174

Query: 307 VGIPYVEVIKHAFLPALI-SYIALIYIVHLESMK-LGLQALP---RANVAKPWMQRLIGF 361
           +G    ++ + A +P LI + + + Y+V L  +K     ALP   R+      + R++  
Sbjct: 175 LGKSVGDMYEGAMVPGLILTSLYVGYVVILTLIKPNAAPALPLEARSLRGAKLLMRVLTS 234

Query: 362 VFGAALISGLSLGVYYGLGWLKPLLGDSALWVIGALLAVVYLGLLKIA 409
           +    ++  L LG  + +G   P  G  A+   GAL+  +    L ++
Sbjct: 235 LVPPLVLIFLVLGTIF-MGIATPTEG-GAMGASGALILALMRKRLSVS 280