Pairwise Alignments

Query, 936 a.a., DNA gyrase, A subunit from Pseudomonas stutzeri RCH2

Subject, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

 Score = 1159 bits (2999), Expect = 0.0
 Identities = 591/942 (62%), Positives = 732/942 (77%), Gaps = 73/942 (7%)

Query: 1   MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLFAMSELGNDWN 60
           M +LAKEI PVNIEDEL+ SYLDYAMSVI+GRALPD RDGLKPVHRRVLFAM+ LGNDWN
Sbjct: 1   MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM 120
           K YKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGS+DGDSAAAM
Sbjct: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120

Query: 121 RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT 180
           RYTEVRM+K+AHELLADL+KETVD+VPNYDGTEQIPAV+PTK+PNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180

Query: 181 NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI 240
           NIPPHNLGEVIDGCLA IDN  ITIDELM +IPGPDFPTA +I+GR GII+AY+TGRG++
Sbjct: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240

Query: 241 YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD 300
           Y+R++A+IE  DK  G++ I+++E+PYQ+NKARLIEKIAELVKEKK+EGI+ LRDESDKD
Sbjct: 241 YMRSKAEIET-DK-NGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKD 298

Query: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGQPRTLNLKELLEAFVRHRR 360
           GMR+VIE +R  V EV+LNNLYA TQLQ+ FGIN+VAL +GQP+  NLKE+L+ FV HRR
Sbjct: 299 GMRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRR 358

Query: 361 EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIAVIKASPTPAEAKDALISTAWESSA 420
           EVVTRRT++ELRKARER HILEG A+AL+NID +I +I+ + TPAEAK+ LI+  W+   
Sbjct: 359 EVVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGN 418

Query: 421 VEAMVERAGADACRPEGLDPQFGLRDGKYFLSPEQAQAILDLRLHRLTGLEHEKLLSEYQ 480
           V AM+ERAG DA RPE L+PQ+G+RDGKYFL+ +QAQAILDLRLH+LTGLEHEK+L EY+
Sbjct: 419 VAAMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYK 478

Query: 481 EILTQIGELIRILTNPVRLMEVIREELEGVKRDFGDARRTEILESRLDLTLADLITEEER 540
           ++L +I  L+ IL +  RLMEVIREELE ++  F DARRTEI  +  D+ + +LI  E+ 
Sbjct: 479 QLLEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDV 538

Query: 541 VVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFSSKGKV 600
           VVT+SH GY K Q L+ Y+AQRRGG+GK+AT +KEEDY+E LLVAN+H  +LLFS++GK 
Sbjct: 539 VVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKT 598

Query: 601 YWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGEDDLDDAEGL 660
           Y +K Y++P ASRT+RG+P+VNLLPL+E ERITA+L V          E  +D       
Sbjct: 599 YRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPV---------TEFSED------- 642

Query: 661 VIEHDDADEVESDDADSDEKDEPTGSYIFMATANGTVKKTPLVQFSRPRTSGLIALKLEE 720
                                     +IFMAT +GTVKKT L QF+  R +GLIAL L +
Sbjct: 643 -------------------------KFIFMATGDGTVKKTSLDQFANVRANGLIALNLRD 677

Query: 721 GDTLIAAAVTDGAQEVMMFSDGGKVIRFKESK-------------------------VRI 755
            D+LI   +TDG  E+M+FS  GKV+RFKES+                         VR 
Sbjct: 678 EDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPVLDENGQPEIKFKGVRP 737

Query: 756 MGRNARGVRGMRLPEGQRIISMLIPETGAQILTASVRGYGKRTAMEEFPRRGRGGQGVIA 815
           MGR A GVRGM+L +G +++S+++P+T   +LT +  GYGKRT++ E+P +GRG QGV++
Sbjct: 738 MGRTAAGVRGMKLADGDQVVSLIVPKTEGDVLTVTENGYGKRTSLSEYPTKGRGTQGVVS 797

Query: 816 MVTNERNGPLVGAVQVLEGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHL 875
           +  +ERNG +VGAVQV EG+E M+I++ GTLVRTRV EVS +GRNTQGVTLI+ S+GE +
Sbjct: 798 IKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRTSEGESV 857

Query: 876 VGLERVQEPSEEDVLEDIEALLDDDALEKEMPVLSTEPSEDE 917
           VGL+R+ E  E ++ E  EAL+++DA     PV   +  E E
Sbjct: 858 VGLQRIDEIEESELPEGEEALVENDA-----PVAQDDDGEQE 894