Pairwise Alignments

Query, 100 a.a., integration host factor, alpha subunit from Pseudomonas stutzeri RCH2

Subject, 90 a.a., DNA-binding protein HU-beta from Vibrio cholerae E7946 ATCC 55056

 Score = 68.6 bits (166), Expect = 2e-17
 Identities = 32/86 (37%), Positives = 50/86 (58%)

Query: 4  LTKAEMAERLYEELGLNKREAKELVELFFEEIRQALEHNEQVKLSGFGNFDLRDKRQRPG 63
          + K ++ E++     ++K  A   ++ F E +   L+  +QV L GFG F +R +  R G
Sbjct: 1  MNKTQLVEQIAANADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG 60

Query: 64 RNPKTGEEIPITARRVVTFRPGQKLK 89
          RNPKTGEEI I   +V +F+ G+ LK
Sbjct: 61 RNPKTGEEIKIAEAKVPSFKAGKALK 86