Pairwise Alignments

Query, 100 a.a., integration host factor, alpha subunit from Pseudomonas stutzeri RCH2

Subject, 90 a.a., DNA-binding protein HU-alpha from Vibrio cholerae E7946 ATCC 55056

 Score = 65.5 bits (158), Expect = 1e-16
 Identities = 34/90 (37%), Positives = 51/90 (56%)

Query: 4  LTKAEMAERLYEELGLNKREAKELVELFFEEIRQALEHNEQVKLSGFGNFDLRDKRQRPG 63
          + K ++ + + E+  L K +AK  +E     +  AL+  +QV+L GFG F +  +  R G
Sbjct: 1  MNKTQLIDFIAEKADLTKVQAKAALEATLGAVEGALKDGDQVQLIGFGTFKVNHRSARTG 60

Query: 64 RNPKTGEEIPITARRVVTFRPGQKLKARVE 93
          RNPKTGEEI I A  V  F  G+ LK  ++
Sbjct: 61 RNPKTGEEIKIAAANVPAFVAGKALKDAIK 90