Pairwise Alignments

Query, 726 a.a., Predicted N6-adenine-specific DNA methylase from Pseudomonas stutzeri RCH2

Subject, 711 a.a., 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) from Xanthomonas campestris pv. campestris strain 8004

 Score =  615 bits (1587), Expect = e-180
 Identities = 345/728 (47%), Positives = 451/728 (61%), Gaps = 34/728 (4%)

Query: 10  TCPKGLEGLLLEEATALGLEEAREQTSAIRGFGALEIAYRLCLWSRLANRVLLVISRFPT 69
           +C KGLE LL +E  ALG  +A    S +   GAL  A R  LWSRLA+RVL  ++ F  
Sbjct: 6   SCAKGLEYLLADELLALGASKATATISGVNVEGALRDAQRAVLWSRLASRVLWPLTEFDC 65

Query: 70  VDAETLYQGVHAVDWADHLQPAGSLAVEFSGRGSGIDNTHFGALKVKDAIVDRLRTASGE 129
            D + LY GV  + W +HL    +L+V+    G+ I +  + A ++KDA+VD +R    E
Sbjct: 66  PDEDALYAGVAELPWHEHLSTGHTLSVDAHVSGTAITHARYAAQRIKDAVVDTIRRQGLE 125

Query: 130 RPSIDKLDPDLRVHLRLDKGQAVLSLDLSGHSLHQRGYRLQQGAAPLKENLAAAILIRAG 189
           RPS+D   PDLR++L L KG+A +S+DL G  LH+RG+R+ Q  APLKENLAAA+L+RAG
Sbjct: 126 RPSVDVESPDLRLNLSLRKGRATISVDLGGGPLHRRGWRMAQNEAPLKENLAAAVLLRAG 185

Query: 190 WPRIAAAGGALTDPMCGVGTFLVEGAMMAADIAPNLKRERWGF---SAWLGHVPAIWTRL 246
           WPR  A GG L DPMCG GT L+EGA+MAAD+AP L  +R+G    S W G     W +L
Sbjct: 186 WPRAYADGGGLLDPMCGSGTLLIEGALMAADVAPGL--QRYGSDIPSRWRGFDRDSWQQL 243

Query: 247 HAEAVARAETGLAKPPLWIRGYEADPRLIQPGRNNIERAGLASWIKVYQGDVGDFEPRPD 306
             EA  R   G A     I G + DP  I+  + N + AG+A  I     +VGD + RP 
Sbjct: 244 VTEARERDSVGRAALKQVIHGSDMDPHAIRAAKENAQVAGVAEAIWFGVREVGDLQTRPQ 303

Query: 307 QNQKGLVICNPPYGERLGDEASLLYLYQNLGERLRQACLGWEAAVFTAAPDLGKRMGIRS 366
               G+V+CNPPY ERL  +A+   LY+ LG+ L++    W A++     +L    G+R+
Sbjct: 304 AT--GVVVCNPPYDERLAADAA---LYRKLGDTLQRVVPQWRASLLCGNAELAYATGLRA 358

Query: 367 HKQYAFWNGALPCKLLLIKVELDQFVTGQRGAASEESTQQQAPVEQARLSEGGQMFANRL 426
            K+Y  +NGA+ C L++     D     +R       T   AP     LSEG QM ANRL
Sbjct: 359 GKKYQLFNGAIECALIV----CDPIAVPRR-------TPLAAP---TALSEGAQMVANRL 404

Query: 427 QKNLRQLGKWARREGIECYRLYDADMPEYALAIDLY-------RDWVHVQEYAPPRSIDP 479
           +KNL++  KW  REGIEC+R+YDAD+PEY+ AID+Y       R ++HVQEYA P +I  
Sbjct: 405 RKNLQKFKKWRAREGIECFRVYDADLPEYSAAIDVYQQADGDRRIFLHVQEYAAPATIPE 464

Query: 480 DKAQARLLDALAAIPQALGIAREKVVVKRRERQSGTRQYERQATQGEFLEVAEGGVKLLV 539
              + RL + LAA  +   +  E+V +K RER  G  +Y R   + E + V E G  L V
Sbjct: 465 ADVRRRLGELLAAAREVFEVPAERVALKSRERGKGGSKYGRFEQRNEIVNVREHGALLRV 524

Query: 540 NLTDYLDTGLFLDHRPLRLRIQREAAGKRFLNLFCYTATATVHAAKGGARSTTSVDLSKT 599
           NL DYLDTGLFLDHRPLR  + +++ G+RFLNLFCYT  A+V AA  GA +TTSVDLS T
Sbjct: 525 NLFDYLDTGLFLDHRPLRGTMAQQSKGRRFLNLFCYTGVASVQAAVAGASATTSVDLSGT 584

Query: 600 YLDWARRNLALNG-LSDRQRLEQGDVMAWLEEDRGEYDLIFIDPPTFSNSKRMEGVFDVQ 658
           YL W   NLALNG    + +L Q D +AWLE +R  +D+IF DPPTFSNS R E  FD+Q
Sbjct: 585 YLQWCADNLALNGQAGSKHKLVQADALAWLEAERAHFDVIFCDPPTFSNSARAED-FDIQ 643

Query: 659 RDHLALLDLAMARLAAGGTLYFSNNFRKFVLDAGLSDRYA-VEEITASTLDEDFRRNPRI 717
           R+H+ LL  A+ARLA GG LYFSNNFR+F LD      +A  EEI+  T+D DF R+ RI
Sbjct: 644 REHVRLLRAAVARLAPGGVLYFSNNFRRFKLDEEAVSEFAQCEEISPRTIDPDFERHARI 703

Query: 718 HRAWKLQA 725
           HRAW+L A
Sbjct: 704 HRAWRLTA 711