Pairwise Alignments

Query, 726 a.a., Predicted N6-adenine-specific DNA methylase from Pseudomonas stutzeri RCH2

Subject, 708 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  580 bits (1496), Expect = e-170
 Identities = 319/721 (44%), Positives = 434/721 (60%), Gaps = 37/721 (5%)

Query: 12  PKGLEGLLLEEATALGLEEAREQTSAIRGFGALEIAYRLCLWSRLANRVLLVISRFPTVD 71
           PKG E  L +E   LG E  RE  + +    +L   Y++ LW+RLA+R++L++       
Sbjct: 9   PKGFEYALAKELETLGAENVRESVAGVYFSASLAQGYQITLWTRLASRIVLILFTGECQS 68

Query: 72  AETLYQGVHAVDWADHLQPAGSLAVEFSGRGSGIDNTHFGALKVKDAIVDRLRTASGERP 131
           AE LY   + +DW  H     + +++F G G  I+N+ FGALK+KDA+VDR R     RP
Sbjct: 69  AEQLYNAAYTIDWPSHFSNRSTFSIDFHGTGGFINNSQFGALKIKDAVVDRFRDDDLSRP 128

Query: 132 SIDKLDPDLRVHLRLDKGQAVLSLDLSGHSLHQRGYRLQQGAAPLKENLAAAILIRAGWP 191
            + K  PD+R+     +G+  + ++ SG +LHQRGYR   G APLKENLAA +L R+GW 
Sbjct: 129 DVVKGHPDMRIDAHYGRGKITIGINFSGAALHQRGYRGNTGEAPLKENLAANMLYRSGW- 187

Query: 192 RIAAAGGALTDPMCGVGTFLVEGAMMAADIAPNLKRERWGFSAWLGHVPAIWTRLHAEAV 251
             A     L DP CG GT L+E A+MA DIAP L RER+GF  W  H  A+W ++  EA 
Sbjct: 188 --ADNPVTLLDPFCGSGTVLIEAALMACDIAPGLMRERFGFEHWRRHDQALWQQVIEEAK 245

Query: 252 ARAETGLAKPPLWIRGYEADPRLIQPGRNNIERAGLASWIKVYQGDVGDFEPRPDQNQKG 311
           ARA  G  +  L   G + D R++   + N   AG+  +I     +  + EP   +   G
Sbjct: 246 ARASLGKTRCQLKFYGSDIDSRVVALAKRNANSAGVFDFIDFKVANALNLEPPVAE---G 302

Query: 312 LVICNPPYGERLGDEASLLYLYQNLGERLRQACLGWEAAVFTAAPDLGKRMGIRSHKQYA 371
           +V+ NPPYGERLG+  SLL LY  LGE+ +Q+  GW+  +  +  +L   + +++ KQ  
Sbjct: 303 MVLTNPPYGERLGNVTSLLQLYFQLGEKFKQSYGGWKLGLLCSDMELVSSLKLKADKQMK 362

Query: 372 FWNGALPCKLLLIKVELDQFVTGQRGAASEESTQQQAPVEQARLSEGGQM---FANRLQK 428
            +NGAL C   L  +                ST++  PV+     +GG++   FANRL+K
Sbjct: 363 MYNGALECAFNLYTLHAT-------------STRRDIPVDTT--GQGGEIAAPFANRLKK 407

Query: 429 NLRQLGKWARREGIECYRLYDADMPEYALAIDLYRDWVHVQEYAPPRSIDPDKAQARLLD 488
           NL+QL KWA+REGI+ YRLYDAD+PEY +A+D Y D+V VQEYA P +I     + RL D
Sbjct: 408 NLKQLEKWAKREGIDSYRLYDADIPEYNVAVDRYLDYVVVQEYAAPSAIPEAVTKRRLTD 467

Query: 489 ALAAIPQALGIAREKVVVKRRERQSGTRQYERQATQGEFLEVA--EGGVKLLVNLTDYLD 546
            L A+P+ALGI  +K+V+K RERQ GT QY++    GE LE+   E G    +NLTDYLD
Sbjct: 468 VLLALPRALGIDPDKIVLKTRERQKGTNQYQK--LDGEKLELVTTEYGCSFKLNLTDYLD 525

Query: 547 TGLFLDHRPLRLRIQREAAGKRFLNLFCYTATATVHAAKGGARSTTSVDLSKTYLDWARR 606
           TGLFLDHR  R  +  +A  +  LNLF YT +A+VHA KGGA+S T+VD+S TYL+WA+ 
Sbjct: 526 TGLFLDHRLTRKLVGEKAKNRDVLNLFAYTGSASVHAGKGGAKSVTTVDMSNTYLNWAKD 585

Query: 607 NLALNGLSDRQ-RLEQGDVMAWLEEDRGEYDLIFIDPPTFSNSKRMEGVFDVQRDHLALL 665
           N  LNGL  RQ + EQ D + W+ +   ++DLIFIDPPTFSNSKRME  FDVQRDH+ LL
Sbjct: 586 NFMLNGLIGRQYQFEQADCLQWIRDCERQFDLIFIDPPTFSNSKRMEDSFDVQRDHVDLL 645

Query: 666 DLAMARLAAGGTLYFSNNFRKFVLDAGLSDRYAVEEITASTLDE-----DFRRNPRIHRA 720
                 L  GG + FSNN RKF +D    +  A   + A  +D+     D+ RNP+IH  
Sbjct: 646 ASLKKLLRPGGEIVFSNNKRKFKMD---MEALAAAGLKAVNIDDKVLPMDYARNPQIHNC 702

Query: 721 W 721
           W
Sbjct: 703 W 703