Pairwise Alignments

Query, 726 a.a., Predicted N6-adenine-specific DNA methylase from Pseudomonas stutzeri RCH2

Subject, 396 a.a., hypothetical SAM-dependent methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  102 bits (253), Expect = 5e-26
 Identities = 98/320 (30%), Positives = 145/320 (45%), Gaps = 17/320 (5%)

Query: 396 RGAASEESTQQQAPVEQARLSE-GGQMFANRLQKNLRQLGKWARREGIECYRLYDADMPE 454
           RGA S ES  Q       R  E   + F  R+ +         R +G+  YRL  A+   
Sbjct: 52  RGAWSGESQIQVRVWTFDREEEIDREFFKRRILRAQAGRDDLIREQGLTGYRLIAAESDG 111

Query: 455 Y-ALAIDLYRDWVHVQEYAPPRSIDPDKAQARLLDALAAI-PQALGIAREKVVVKRRERQ 512
              + ID Y + +  Q      S+  D  +  ++D LA + P      R  V  +++E  
Sbjct: 112 LPGITIDKYANVLVCQLL----SMGADVWRDTIVDVLAELYPDCAIYERSDVDSRKKEGL 167

Query: 513 SGTRQYERQATQGEFLEVAEGGVKLLVNLTDYLDTGLFLDHRPLRLRIQREAAGKRFLNL 572
           + T            L + E G+K+ V++T    TG +LD R  R    R   GK  LN 
Sbjct: 168 ASTMGLLHGTLPEMPLIIEENGIKIAVDVTKGHKTGFYLDQRDNRAIAARFVKGKSVLNC 227

Query: 573 FCYTATATVHAAKGGARSTTSVDLSKTYLDWARRNLALNGLS-DRQRLEQGDVMAWLEED 631
           FCYT T  ++AAK GA S  +VD+S   LD AR N+ +NGLS D     + DV   L + 
Sbjct: 228 FCYTGTFGLYAAKAGAASIENVDVSSLALDTARLNMRVNGLSDDNVHYNEADVFKLLRQY 287

Query: 632 RGE---YDLIFIDPPTFSNSKRM-----EGVFDVQRDHLALLDLAMARLA-AGGTLYFSN 682
           R E   +D+I +DPP F+++K        G  D+    L LL+     L  +   L  ++
Sbjct: 288 RDEGKTFDVIVLDPPKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLMPAD 347

Query: 683 NFRKFVLDAGLSDRYAVEEI 702
            F+K V DA L  +  ++ I
Sbjct: 348 LFQKIVADAALDAKREIQFI 367