Pairwise Alignments

Query, 726 a.a., Predicted N6-adenine-specific DNA methylase from Pseudomonas stutzeri RCH2

Subject, 418 a.a., DNA methyltransferase from Herbaspirillum seropedicae SmR1

 Score =  175 bits (443), Expect = 5e-48
 Identities = 121/390 (31%), Positives = 187/390 (47%), Gaps = 28/390 (7%)

Query: 11  CPKGLEGLLLEEAT--------ALGLEEAREQTSAIRGFGALEIAYRLCLWSRLANRVLL 62
           CP+GLE  L EE          A  L+   +    +   G L  AY++ L SR+A+RVLL
Sbjct: 14  CPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQMNLHSRIASRVLL 73

Query: 63  VISRFPTVDAETLYQGVHAVDWADHLQPAGSLAVEFSGRGSGIDNTHFGALKVKDAIVDR 122
            +      +   +Y    A  W D  + + ++ V+ +   S + +  F  LK+KDAI DR
Sbjct: 74  RMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLEFTTLKIKDAICDR 133

Query: 123 LRTASGERPSIDKLDPDLRVHLRLDKGQAVLSLDLSGHSLHQRGYRLQQGAAPLKENLAA 182
                  RPS++   PD+R+   +D     + LD SG +L +RG+R + G APL+ENLAA
Sbjct: 134 FLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWREETGDAPLRENLAA 193

Query: 183 AILIRAGWPRIAAAGGALTDPMCGVGTFLVEGAMMAADIAPNLKRERWGFSAWLGHVPAI 242
            +L  AGW      G  L DPMCG GT L E A + A + P  +R R+ F  +       
Sbjct: 194 GLLRTAGW----KPGVPLFDPMCGSGTILAEAAQIIAGVPPGARR-RFAFEKFSNFDADA 248

Query: 243 WTRLHAEAVARAETGLAKPPLWIRGYEADPRLIQPGRNNIERAGLASWIKVYQGDVGDFE 302
           W  +  +   +       P L+  G +    +++  R N+ RAG+   + + Q +  + +
Sbjct: 249 WFAIKGD--FKPNPIPTTPTLF--GSDISGDMVELTRKNLVRAGVHFEVPLKQIEAQEIK 304

Query: 303 PRPDQNQK---GLVICNPPYGERLG--------DEASLLYLYQNLGERLRQACLGWEAAV 351
           P  D   K   G+++ NPPYGER+G         E      +      L+Q   GW   +
Sbjct: 305 PPVDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFAGWSVFL 364

Query: 352 FTAAPDLGKRMGIRSHKQYAFWNGALPCKL 381
           F+A   L K M ++  ++  F+NGAL C+L
Sbjct: 365 FSADLGLPKLMRLKESRKTPFFNGALECRL 394