Pairwise Alignments

Query, 726 a.a., Predicted N6-adenine-specific DNA methylase from Pseudomonas stutzeri RCH2

Subject, 713 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  583 bits (1503), Expect = e-170
 Identities = 314/719 (43%), Positives = 432/719 (60%), Gaps = 28/719 (3%)

Query: 12  PKGLEGLLLEEATALGLEEAREQTSAIRGFGALEIAYRLCLWSRLANRVLLVISRFPTVD 71
           PKG E  L +E T  G  E +E  + +     L +AYR+ LW+RLA+R++LVI + P   
Sbjct: 9   PKGFEYSLAQELTEFGATEIKESVAGVYFTAPLALAYRITLWTRLASRIVLVIYKGPCES 68

Query: 72  AETLYQGVHAVDWADHLQPAGSLAVEFSGRGSGIDNTHFGALKVKDAIVDRLRTASGERP 131
           AE LY   + +DW+ H     + +++F G G  I+NT FGALK+KDAIVDR R     RP
Sbjct: 69  AEQLYNAAYCIDWSAHFSNRNTFSIDFHGTGGFINNTQFGALKIKDAIVDRFRDDGDARP 128

Query: 132 SIDKLDPDLRVHLRLDKGQAVLSLDLSGHSLHQRGYRLQQGAAPLKENLAAAILIRAGWP 191
           ++ ++D D+++      G   ++++ SG SLHQRGYR   G APLKENLAA +L+R+GW 
Sbjct: 129 NVARIDADIKIDAHFRNGVITIAMNFSGPSLHQRGYRSTTGEAPLKENLAANMLVRSGWK 188

Query: 192 RIAAAGGALTDPMCGVGTFLVEGAMMAADIAPNLKRERWGFSAWLGHVPAIWTRLHAEAV 251
              AA   L DP CG GT L+E A+MAADIAP L+R R+GF  W  H  A W  +  EA 
Sbjct: 189 ---AAPTTLLDPFCGSGTVLIEAALMAADIAPGLQRSRFGFEHWRRHDKATWHEILEEAK 245

Query: 252 ARAETGLAKPPLWIRGYEADPRLIQPGRNNIERAGLASWIKVYQGDVGDFEPRPDQNQKG 311
           ARA  G+ +  +   G + D RL+   + N + AG+   I     +  + EP   +   G
Sbjct: 246 ARASLGVKRCDVKFYGSDIDSRLVALAKRNAQNAGVFELIDFKVANALNVEPPAAE---G 302

Query: 312 LVICNPPYGERLGDEASLLYLYQNLGERLRQACLGWEAAVFTAAPDLGKRMGIRSHKQYA 371
            +I NPPYGERLG  + LL LY  LG++ ++   GW+ A+  +  +L   + +++ KQ  
Sbjct: 303 YLITNPPYGERLGSVSELLQLYYQLGDKFKKEFGGWKVAMLCSDIELISALKLKADKQMK 362

Query: 372 FWNGALPCKLLLIKVELDQFVTGQRGAASEESTQQQAPV--EQARLSEGGQMFANRLQKN 429
            +NGAL C   L  +               +ST++  PV  E   +++    FANR++KN
Sbjct: 363 MFNGALECAFNLYTLHA-------------QSTRRDTPVLPEGVDIADIAPAFANRIKKN 409

Query: 430 LRQLGKWARREGIECYRLYDADMPEYALAIDLYRDWVHVQEYAPPRSIDPDKAQARLLDA 489
            +QL KWA++EGI+ YRLYDAD+PEY +A+D Y D + VQEY  P SI     + RL D 
Sbjct: 410 AKQLEKWAKKEGIDSYRLYDADIPEYNVAVDRYLDHIVVQEYMAPASIPEAVTKRRLSDV 469

Query: 490 LAAIPQALGIAREKVVVKRRERQSGTRQYERQATQGEFLEVAEGGVKLLVNLTDYLDTGL 549
           L A+P A+G+   K+ +K RERQ GT QY++   +   L   E G K  +NLT YLDTGL
Sbjct: 470 LLALPAAIGVDPHKITMKTRERQKGTNQYQKLDERKLELITTEYGAKFKLNLTGYLDTGL 529

Query: 550 FLDHRPLRLRIQREAAGKRFLNLFCYTATATVHAAKGGARSTTSVDLSKTYLDWARRNLA 609
           FLDHR  R  + +++ G+R LNLF YT +A+VHAA GGA+S T+VD+S TYL WA+ N A
Sbjct: 530 FLDHRLTRRLVGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFA 589

Query: 610 LNGLSDRQ-RLEQGDVMAWLEED----RGEYDLIFIDPPTFSNSKRMEGVFDVQRDHLAL 664
           LN LS +Q    Q D + W+ +       +YDLIFIDPPTFSNSKRME  FDVQRDH+ L
Sbjct: 590 LNDLSGKQYEFVQADCLQWIRDSAHDKSAQYDLIFIDPPTFSNSKRMEDSFDVQRDHVNL 649

Query: 665 LDLAMARLAAGGTLYFSNNFRKFVLDAG--LSDRYAVEEITASTLDEDFRRNPRIHRAW 721
           L + +  L+  G + FSNN RKF +D    +  +  VE I   TL  D++RNP IH  W
Sbjct: 650 LGMLIKLLSPNGEIVFSNNKRKFKMDTDTLVKMKIKVENIDDLTLPMDYKRNPHIHNTW 708