Pairwise Alignments

Query, 383 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

Subject, 396 a.a., 3-phenylpropionate MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (341), Expect = 2e-36
 Identities = 110/376 (29%), Positives = 175/376 (46%), Gaps = 7/376 (1%)

Query: 1   MNAPLPYWRLSGFYFFYFALLGSTAPFLGLYFDHLGFSPERIGELIAIPMLMRCLAPNLW 60
           M  P PY  +S ++  +F   G   PF  L+F+  G S   IG L+ I    RC+A  + 
Sbjct: 1   MFTPTPYGWISQYFIGFFFAYGVYLPFWSLWFEDQGVSATDIGVLVGIGFATRCVANLVL 60

Query: 61  GWLGDATGRRLEIVRLGALCTLLSFGLIFFDKSFAWL-AMVMALHAFFWHAVLPQFEVIT 119
                   + +  +R  +   +L  G  FF     WL A+   L       V+P  + + 
Sbjct: 61  TPRLHRVEQLMPALRWLSFAAMLFVGFHFFTGGSFWLMALATVLFNLCCGPVVPISDAMA 120

Query: 120 LAHLHEQAERYSQVRLWGSIGFILAVVGLGLLFQRL-SLDLYPTAVAVVMVGIVLSSFWV 178
             +   +   Y + RLWGSI FI     +G L  +  SL +  TA+  V V  +LS   +
Sbjct: 121 NYYAKLKMLDYGRTRLWGSIAFIAGSTVVGFLVAKWGSLMILYTALVGVAVSWLLSLRQI 180

Query: 179 PNAHPRQRADVAGQGGFLAQLRRPGVLAFYACVALMQLAHGPYYTFFSIHLEALGYSRSF 238
                 +    A +      L    V+ F   VAL+Q +H  YY+F SI+ +  G+S   
Sbjct: 181 TPMPVTEHEAHAVRPKLKELLTEWPVVKFLLLVALIQGSHAAYYSFGSIYWKQAGHSEDI 240

Query: 239 IGLMWALGVVAEILLFLGMARLLERFSLRQVLLASFLIAALRWVLLGQFADHLAVLLIAQ 298
           IG +W+LGVVAE+L+F    R    +SLR +   + L    RW L       LA++ I Q
Sbjct: 241 IGYLWSLGVVAEVLVFAFSKRWFAGWSLRTLFFVASLGVIARWGLTASTTTILALVAI-Q 299

Query: 299 LMHAATFGSFHAAAIHFVQRSFGHRQQGQGQALYASLSGIGGALGAL--YAGYAWSGLGP 356
           L+H  TF   H AAI ++Q +  ++     QALY ++  +G  + A+   +G+ +   G 
Sbjct: 300 LLHGVTFAIAHIAAIQYIQHAPQNKMVAL-QALYNAIP-LGAVIAAVTTLSGWGYEHWGA 357

Query: 357 SWSFAIASLAALAAAV 372
           +  +A+A++  LA  +
Sbjct: 358 AVFWAMAAMGGLALLI 373