Pairwise Alignments

Query, 252 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (255), Expect = 7e-27
 Identities = 77/244 (31%), Positives = 116/244 (47%), Gaps = 22/244 (9%)

Query: 14  HSHDHPQLVFGLKGLLEFEIGGRVSCVGEQSLAVIPSATHHACASTSG-SHCLVLDLP-- 70
           H H + Q+V GLKG  EFE+ G  + VG     V+ S + HA     G S  LVL++P  
Sbjct: 47  HDHSYTQIVIGLKGQAEFEVRGMGNIVGPGQGCVVTSGSDHAFGGVVGQSDILVLNMPVP 106

Query: 71  --SENWVRENLGHHAERSLRLLDRPDTPRLAPAQQSLVAWLARSP--------INDSVIA 120
              +  +   L   A   +         RL    Q LV  +  SP         ND+V+A
Sbjct: 107 SDDDPLLLRKLNELAVGDVYFQLDGQIQRLI---QMLVQEMQASPDDLLLGRACNDTVVA 163

Query: 121 AQGTALLLASLANTDQPPRDRHGLPLAAVDAFIDQHLPHPLQVADLARIAGCSVARLHAR 180
                +  ++LA+  +  R      +  VD +I+QHL H + VA LA     S ++ H  
Sbjct: 164 LLQRHI--SALASVHKESR----FDMEVVDRYIEQHLAHRISVAQLAGSVFLSESQFHVL 217

Query: 181 FLHETGKTPMEYVRERRLQHAEALLHDTRLPVGEIAARVGYASQSAFTAALVRVHGRSPR 240
           F  + G TP +YV  +R+  A+ L+   RL +G++A   G+++QS FT    R+HG SP 
Sbjct: 218 FKEQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFTHTFSRLHGISPS 277

Query: 241 MLRR 244
             +R
Sbjct: 278 QYKR 281