Pairwise Alignments

Query, 252 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 57.0 bits (136), Expect = 4e-13
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 16/241 (6%)

Query: 16  HDHPQLVFGL--KGLLEFEIGGRVSCVGEQSLAVI-PSATHHACA-STSGSHCLVLDLPS 71
           H H  +  GL  +G+  F   G    VG+  + ++ P   H   A S +G    V  +  
Sbjct: 32  HYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHAHSNTGYQVQVFSIEP 91

Query: 72  ENWVRENLGHHAERSLRLLDR--PDTPRLAPAQQSLVAWLAR---SPINDSVIAAQGTAL 126
           E W+++ L  +    +   ++     P L  + Q L   L +   S +    +  QG A 
Sbjct: 92  E-WLQQTLEANQIEQVIGFEQLIVQDPTLFHSLQQLHHLLRQDNLSQLAKDCLPYQGFAP 150

Query: 127 LLASLANTDQP---PRDRHGLPLAAVDAFIDQHLPHPLQVADLARIAGCSVARLHARFLH 183
           LL   +   QP   P  +H L L  +  ++   L  P+++  LA++   S  +    F  
Sbjct: 151 LLERYSYLKQPTVKPLGQHNLAL--LKEWVLSQLDQPIRLEQLAQLCQLSPTQFQRHFKA 208

Query: 184 ETGKTPMEYVRERRLQHAEALLHDTRLPVGEIAARVGYASQSAFTAALVRVHGRSPRMLR 243
           +TG TP  ++R  RL+ A  LL   + P  ++A +VG+  Q+ F+ A    +G SP ++ 
Sbjct: 209 QTGLTPYAWLRRLRLEQAMKLLQSGK-PGTDVAYQVGFYDQAHFSKAFKATYGLSPSLIT 267

Query: 244 R 244
           R
Sbjct: 268 R 268