Pairwise Alignments

Query, 450 a.a., type I secretion membrane fusion protein, HlyD family from Pseudomonas stutzeri RCH2

Subject, 440 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  173 bits (439), Expect = 9e-48
 Identities = 113/390 (28%), Positives = 206/390 (52%), Gaps = 6/390 (1%)

Query: 54  WANYAVLEEVTTGEGKAIPSSKIQTVQNLEGGIVAQIYVREGQVVNKGDTLLRLDNTRFL 113
           WA  A L+      G     S  +TVQ+LEGGIV ++ V +G +V  GD LL LDNT+  
Sbjct: 40  WAALAPLDSSALAPGVVTVKSYRKTVQHLEGGIVRELRVHDGDLVKTGDVLLVLDNTQAR 99

Query: 114 SNQEETEAERLSLLARVERLAAEAEG--RPLALPEEITRD--APQLAEDERALYESRQQR 169
           S  E T ++ ++ L    RL AE +    PLA+P     D    +  + E  ++++R+  
Sbjct: 100 SEMETTRSQLIAALQLQARLEAERDALPEPLAVPALDPADPRVQEARDSEARIFQTRRTS 159

Query: 170 LRSEQRILKEQLTQKQQEVAEFRSKQQQYRSSLSLIQQELNMSTPLVETGAISQVEILRL 229
           L  E  + ++ + Q ++++  F++     ++  +  Q+E+     L+  G + +  +   
Sbjct: 160 LLGEIGLQEKTIGQIEEQIRGFKAIIASKQALAASYQEEIVDLRALLAEGYVDKQRLREQ 219

Query: 230 RRSIVDVRGALDATTLALPRAEAAASEIQSRIEQSELAFRAEAFKDLNAARTLLQKITAT 289
            RS+  ++  +  +   + +A     E + +I Q +  F +E    L  ART + ++   
Sbjct: 220 ERSLSRLQTEIAESQSEIAQAHVHIDEARLKILQLKKTFASEVAGLLGDARTKVYELRER 279

Query: 290 SVAIDDRVSRTTVVSPVHGIIKQLRINTIGGVVQPGSDLLEIVPLEDSLLIEAKVRPQDI 349
              + DR  RT +++P  G++  + ++T+G VV PG+ LL+IVP  + L+IEA+V P DI
Sbjct: 280 LATLQDRDQRTDILAPESGMVMGMTVHTLGAVVSPGTALLDIVPANEELIIEAQVSPMDI 339

Query: 350 AFLHPGQKAMVKFSAYDYTIYGGLKANLELISADTITDKD-GRSFYLIQVRTEKNYLGSP 408
             +  G+ A ++FSA+  +    ++  L  ISAD + +KD G ++YL +V        + 
Sbjct: 340 DRIALGKLADIRFSAFKSSTTPVIEGQLVQISADRLINKDTGTAYYLARVALTDKGRQAL 399

Query: 409 GHQLVIIPGMVATVDIITGEKSVLDYMLKP 438
           G+ L ++PGM   V + TG +++L Y+++P
Sbjct: 400 GN-LTLVPGMPVEVLVNTGARTLLQYLIQP 428