Pairwise Alignments

Query, 319 a.a., Permeases of the drug/metabolite transporter (DMT) superfamily from Pseudomonas stutzeri RCH2

Subject, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (392), Expect = 1e-42
 Identities = 110/303 (36%), Positives = 154/303 (50%), Gaps = 13/303 (4%)

Query: 16  MRPLDMFRLLALAAIWGASFLFMRVIAPVLGTFPTAFFRVLLATAGLLAILVVLRRRWDF 75
           M  +++ +LL LAAIWG SFLFMR+ A   G       RV  A   L  +  +LRR    
Sbjct: 1   MSLVNLLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPI 60

Query: 76  RGKLGLCLVLGVINSGVPFALYAVAAQLVPAGYSAIFNATTPMMGVLIGALFFAEELTLA 135
           R      L+LG+IN+ VPF L+A AA  +     +I N+T P+ G +IG L+    L+  
Sbjct: 61  RQHWPHFLILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRK 120

Query: 136 KVLGVFSGLGGVALLMRIGPVPLEMGLLLGALACLGATACYGLGGFLTRRWINRDGGLDS 195
            V G+  G+ GVA+++    V +     L  +    A A YGL    T+    +   L +
Sbjct: 121 AVAGLLLGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTK----QAPQLSA 176

Query: 196 ELVAFGSQAGAALCLLPLFGLSLLDAPPPSWGDTSVWLSLLGLGLVCTAFAYILYFRLLA 255
              A GS   A L + PL     L   P S      W +++ LG++CT  AY++YFRL+ 
Sbjct: 177 FENAHGSMWAACLWVAPLMWFVPLRETPSS----LEWGAVILLGVICTGLAYLIYFRLVK 232

Query: 256 DIGPVKTLTVTFLIPPFGVLWGVLFLDEPLSWAYVQGGALIGLALWLI----LRQAP-AA 310
            IG   TL+VTFLIP FG+LWG   LDEP+    + G  L+     L+    LR A  + 
Sbjct: 233 AIGAASTLSVTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAGTMLVTGFSLRNARLSR 292

Query: 311 QPQ 313
           QPQ
Sbjct: 293 QPQ 295