Pairwise Alignments

Query, 146 a.a., Universal stress protein UspA and related nucleotide-binding proteins from Pseudomonas stutzeri RCH2

Subject, 310 a.a., universal stress protein UspE (RefSeq) from Shewanella amazonensis SB2B

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 19  VVARAQVLASTSGAKLSLVHIIEPMAMAFGGDVP-MDLSMLQQQQFDQARGRMNGFADSY 77
           V+  AQ LA+   AK+ LV+      +    ++P  D     +    Q   R+   A SY
Sbjct: 176 VIEYAQNLAAQFDAKVHLVNGYPGTPVNLAIELPDFDAHSYNESIRMQHEQRVQYLATSY 235

Query: 78  PGLAPENRHLAYGQPRQEVHRLAKEQGCDLIVVGSHGRHGL-ALLLGSTANDILHGAPCD 136
            G+  E  H+  G P   +  LA +   +L+++G+ GR GL A L+G+TA  ++    CD
Sbjct: 236 -GIPVEACHVKEGLPEDVIPELAVDLDAELVILGTVGRTGLSAALIGNTAEHVIDSLNCD 294

Query: 137 VLAVR 141
           +LA++
Sbjct: 295 LLAIK 299



 Score = 37.4 bits (85), Expect = 2e-07
 Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 4/143 (2%)

Query: 3   YKHILVAIDLTEECHPVVARAQVLASTSGAKLSLVHIIEPMAMAFGGDVPM-DLSMLQQQ 61
           YK +LV +D T++  P + RA  LA  + A +++   I   +      +   +   +++ 
Sbjct: 4   YKKLLVVVDPTKDKQPALERAVALAEKNQASITVFLSIFDFSYEMTSILSAHEREAMRKG 63

Query: 62  QFDQARGRMNGFADSY--PGLAPENRHLAYGQPRQEVHRLAKEQGCDLIVVGSHGRHGL- 118
             DQ    +      +   G+  + + + + +P + +   A E G DLIV G+H    L 
Sbjct: 64  VIDQRVAWLGDLIAPFIQDGIDIQTQVVWHNRPFESIINYAIEGGFDLIVKGTHEHDKLK 123

Query: 119 ALLLGSTANDILHGAPCDVLAVR 141
           A++   T   ++  AP  VL V+
Sbjct: 124 AVIFTPTDWHLMRKAPVPVLLVK 146