Pairwise Alignments

Query, 633 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Pseudomonas stutzeri RCH2

Subject, 555 a.a., energy-dependent translational throttle protein EttA from Vibrio cholerae E7946 ATCC 55056

 Score =  339 bits (870), Expect = 2e-97
 Identities = 202/519 (38%), Positives = 291/519 (56%), Gaps = 12/519 (2%)

Query: 18  LLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEIWRAPGLKIGELPQELPR 77
           +L  +S     G ++ ++G NG GKS++LR++ G     DGE    PGLK+G LPQE   
Sbjct: 21  ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIDGEARPQPGLKVGYLPQEPKL 80

Query: 78  ADDRTVFDVVAEGLAGVGELLAEYHHL-SQNIQDEADLEKLMHVQQALEA----KDGWRL 132
            + +TV +VV E +A V   L     + +   + +AD + L   Q  LEA    K+G  L
Sbjct: 81  DESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDALAKEQGELEALIQAKNGHNL 140

Query: 133 QQLVDSTLSRLQLPA-DRTLAELSGGWRRRVLLAQALVSEPDLLLLDEPTNHLDIGAIAW 191
              ++     L+LP  D  +  LSGG RRRV + + L+  PD+LLLDEPTNHLD  ++AW
Sbjct: 141 DNALERAADALRLPEWDAQVKYLSGGERRRVAICRLLLENPDMLLLDEPTNHLDAESVAW 200

Query: 192 LEEALTGFNGAVLFITHDRAFLQNLATRILELDRGHLIDWNGDYASFLVHKEQQLAAEET 251
           LE  L  + G V+ ITHDR FL N A  ILELDRG  I W G+Y S+L  K+ +L  E +
Sbjct: 201 LERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPWQGNYTSWLEQKDARLKQEAS 260

Query: 252 ANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRAERSERRNVQGKATFQVETAEK 311
                 K + +E  W+RQ  K R+ +++ R+   + L+    ++RN   +    +   E+
Sbjct: 261 QEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNTEHQKRNETNELF--IPPGER 318

Query: 312 SGKQVIVAEQVTFAHVGGEPLIRDFSMVIQRGDRIGLLGANGTGKTTLLKLLLGELHPSS 371
            G +VI  + +T +   G  LI D S  + +G  +G++G NG GK+TL K+L G   P S
Sbjct: 319 LGDKVIEVKNLTKSF-DGRVLIDDLSFSMPKGAIVGIIGPNGAGKSTLFKMLSGVEKPDS 377

Query: 372 GSIEFGTKLEVAYFDQLRHQLELEKTVVDNLAEGREFITIDGQNRHVLSYLGDFLFSPQR 431
           G+IE G  +++A  DQ R  +  + TV   ++EG + I I+       +Y   F F    
Sbjct: 378 GTIELGDTVKLASVDQFRDSMNDKHTVFQEISEGADIIRINNFEIPARAYCSRFNFKGVD 437

Query: 432 ARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELLEEVLLGFQGTVLMV 491
            +  +  LSGGER R+ LAKL     N+L+LDEPTNDLDVETL  LEE LL F G  +++
Sbjct: 438 QQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETLRALEEALLEFPGCAMVI 497

Query: 492 SHDRAFLDNVVTSTLVFQGGGEVREYVGG---YQDWLRQ 527
           SHDR FLD + T  L ++  G+V  Y G    Y +WL+Q
Sbjct: 498 SHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQ 536



 Score =  105 bits (261), Expect = 7e-27
 Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 32/249 (12%)

Query: 3   LLKFTDVSLAYGTTPLLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEIWR 62
           +++  +++ ++    L+D +S+ + +G  V IIG NG GKS++ +++ G    D G I  
Sbjct: 323 VIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGAGKSTLFKMLSGVEKPDSGTIEL 382

Query: 63  APGLKIGELPQELPRADDR-TVFDVVAEGLAGVGELLAEYHHLSQNIQDEADLEKLMHVQ 121
              +K+  + Q     +D+ TVF  ++EG                     AD+ ++ + +
Sbjct: 383 GDTVKLASVDQFRDSMNDKHTVFQEISEG---------------------ADIIRINNFE 421

Query: 122 QALEAKDGWRLQQLVDSTLSRLQLPADRTLAELSGGWRRRVLLAQALVSEPDLLLLDEPT 181
               A           S  +   +   + + ELSGG R RV LA+ L +  ++LLLDEPT
Sbjct: 422 IPARA---------YCSRFNFKGVDQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPT 472

Query: 182 NHLDIGAIAWLEEALTGFNGAVLFITHDRAFLQNLATRILEL-DRGHLIDWNGDYASFLV 240
           N LD+  +  LEEAL  F G  + I+HDR FL  +AT IL+  D G +  + G+Y  ++ 
Sbjct: 473 NDLDVETLRALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYME 532

Query: 241 HKEQQLAAE 249
             +Q L A+
Sbjct: 533 WLKQTLGAQ 541