Pairwise Alignments

Query, 633 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Pseudomonas stutzeri RCH2

Subject, 639 a.a., ABC transporter ATPase component (RefSeq) from Shewanella loihica PV-4

 Score =  659 bits (1700), Expect = 0.0
 Identities = 348/639 (54%), Positives = 454/639 (71%), Gaps = 10/639 (1%)

Query: 1   MTLLKFTDVSLAYGTTPLLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEI 60
           M+L++  + SLAYG TPLL    + I  GERVCI+GRNG GKSS+++++ G+   DDGE 
Sbjct: 1   MSLVRINNGSLAYGYTPLLQNADFTIEPGERVCIVGRNGAGKSSLMKVIGGEVLLDDGEF 60

Query: 61  WRAPGLKIGELPQELPRADDRTVFDVVAEGLAGVGELLAEYHHLSQNIQ--DEADLEKLM 118
             A  +K+  L Q+ P+A+  TV+  ++ GL  VGE L  YH LS ++   D  ++E+L+
Sbjct: 61  NIANDVKVSRLQQDPPKAEQGTVYAYISAGLQEVGEKLERYHQLSHDVAHVDAQEMERLL 120

Query: 119 ----HVQQALEAKDGWRLQQLVDSTLSRLQLPADRTLAELSGGWRRRVLLAQALVSEPDL 174
                +Q  L+  +GW+L   ++ T   L L AD +LA LSGGW+R+V LA+ALVSEPDL
Sbjct: 121 KQMERLQSDLDHLNGWQLDTRINQTCELLGLDADASLASLSGGWQRKVALARALVSEPDL 180

Query: 175 LLLDEPTNHLDIGAIAWLEEALTGFNGAVLFITHDRAFLQNLATRILELDRGHLIDWNGD 234
           LLLDEPTNHLDI  I WLEE L  + GA++FI+HDR F+Q +ATRI++LDRG +  W GD
Sbjct: 181 LLLDEPTNHLDIDTIEWLEEFLLNYRGAIVFISHDRGFIQRMATRIVDLDRGVVTSWPGD 240

Query: 235 YASFLVHKEQQLAAEETANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRAERSE 294
           Y ++L  K + L  EE  NA FDKKLA+EE WIRQGIKARRTRNEGRVRALKALR ER E
Sbjct: 241 YQTYLDGKAEWLRVEEEKNAQFDKKLAEEEAWIRQGIKARRTRNEGRVRALKALRMERME 300

Query: 295 RRNVQGKATFQVETAEKSGKQVIVAEQVTFAHVGGEPLIRDFSMVIQRGDRIGLLGANGT 354
           R N QG A   V   E+SGK V   + + + ++  + L+++F+  + RGDRI L+G NG 
Sbjct: 301 RINRQGGAKMAVADTERSGKLVFDIKDLNY-NLPDKNLVKNFTTSVMRGDRIALIGPNGC 359

Query: 355 GKTTLLKLLLGELHPSSGSIEFGTKLEVAYFDQLRHQLELEKTVVDNLAEGREFITIDGQ 414
           GK+TL+KLL+G+L P SG ++ GTKLEVAYFDQ R  L+ EKTV DN+ EG++ +TI+GQ
Sbjct: 360 GKSTLIKLLIGQLAPQSGEVKVGTKLEVAYFDQYREALDPEKTVEDNVGEGKKTVTINGQ 419

Query: 415 NRHVLSYLGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETL 474
           +RH+LSYL DFLFSP RARTPVKALSGGE+ RLLLA+L  +PANL++LDEPTNDLD+ETL
Sbjct: 420 DRHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLARLLLRPANLIILDEPTNDLDIETL 479

Query: 475 ELLEEVLLGFQGTVLMVSHDRAFLDNVVTSTLVFQGGGEVREYVGGYQDWLRQGGS-PRL 533
           ELLE +L  +QGT+L+VSHDRAF+DN VTS+  F G G   EYVGGYQD + QG      
Sbjct: 480 ELLESLLTDYQGTLLLVSHDRAFIDNTVTSSWWFTGNGGWSEYVGGYQDAVSQGAKFYSE 539

Query: 534 LGVAESGGEAKKAQQAPVAAVVAEVAPAKKKLSYKLQRELEALPGQIDEAEKAIEALQAE 593
             VA+   + K A+  PV       A A+KKLSYKLQREL+ALP ++++ E  IE+LQA 
Sbjct: 540 EPVAKDAVQPKVAE--PVKRETKAAAKAEKKLSYKLQRELDALPAKMEQLEAEIESLQAV 597

Query: 594 ISDPAFYQQAADKTAAVLSRLEALQAELDGLLERWAELE 632
           I++P FY QA D  ++ L+ L  L+ EL+   ERW ELE
Sbjct: 598 INEPDFYTQAQDLVSSRLNELAELEQELEVCFERWEELE 636