Pairwise Alignments

Query, 633 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Pseudomonas stutzeri RCH2

Subject, 594 a.a., ATP-binding cassette protein, ChvD family from Sphingomonas koreensis DSMZ 15582

 Score =  352 bits (903), Expect = e-101
 Identities = 187/514 (36%), Positives = 301/514 (58%), Gaps = 11/514 (2%)

Query: 17  PLLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEIWRAPGLKIGELPQELP 76
           P+L  ++ Q  +G ++ I+G NG GKS++++++ G      GE W    + +G L QE  
Sbjct: 57  PVLSNINLQFYQGAKIGIVGPNGAGKSTLIKIMAGIDKDFSGEAWPGENITVGYLEQEPQ 116

Query: 77  RADDRTVFDVVAEGLAGVGELLAEYHHLSQNIQDEAD-------LEKLMHVQQALEAKDG 129
               ++V + V +G     +L+  ++ +S  + D  D       +E++  +Q  ++A DG
Sbjct: 117 LDPSKSVLENVKDGARETADLVERFNAISAEMGDPKDDTDFDALMEEMGDLQAKIDAVDG 176

Query: 130 WRLQQLVDSTLSRLQLP-ADRTLAELSGGWRRRVLLAQALVSEPDLLLLDEPTNHLDIGA 188
           W L   ++  +  L+ P  D ++  LSGG +RRV L + L+ +P +LLLDEPTNHLD  +
Sbjct: 177 WSLDNQLEIAMEALRCPPGDWSVDNLSGGEKRRVALTRLLIQKPSILLLDEPTNHLDAES 236

Query: 189 IAWLEEALTGFNGAVLFITHDRAFLQNLATRILELDRGHLIDWNGDYASFLVHKEQQLAA 248
           + WLE  L  + GAVL ITHDR FL N+   ILELDRG    + G+Y+++L  K ++L  
Sbjct: 237 VKWLENHLKEYAGAVLMITHDRYFLDNVVDWILELDRGKYFPYEGNYSTYLEKKAKRLEQ 296

Query: 249 EETANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRAERSERRNVQGKATFQVET 308
           E+       K +  E  WIR G+K R+T+++ R+   + L  ++S+R    GKA   ++ 
Sbjct: 297 EDREATGRQKAIKDELEWIRAGVKGRQTKSKARITRFEQLVEQQSQR--TPGKAQIVIQV 354

Query: 309 AEKSGKQVIVAEQVTFAHVGGEPLIRDFSMVIQRGDRIGLLGANGTGKTTLLKLLLGELH 368
            E+ G +VI  E ++ A+ G + L  + S  +  G  +G++G NG GK+TL KL+ G+  
Sbjct: 355 PERLGGKVIEVENLSKAY-GDKLLFENLSFTLPAGGIVGVIGPNGAGKSTLFKLITGQET 413

Query: 369 PSSGSIEFGTKLEVAYFDQLRHQLELEKTVVDNLAEGREFITIDGQNRHVLSYLGDFLFS 428
           P SG+IE GT + + Y DQ R  L+  K V + +++G +++ ++G ++   +Y+G F F 
Sbjct: 414 PDSGTIEIGTTVRLGYVDQSRDHLDPSKNVWEEISDGLDYMKVNGHDQSTRAYVGAFNFK 473

Query: 429 PQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELLEEVLLGFQGTV 488
            Q  +  V  LSGGER R+ +AK+  +  N+L+LDEPTNDLDVETL  LEE +  F G  
Sbjct: 474 GQDQQKNVGKLSGGERNRVNIAKMLKRGGNVLLLDEPTNDLDVETLGALEEAIENFAGCA 533

Query: 489 LMVSHDRAFLDNVVTSTLVFQGGGEVREYVGGYQ 522
           +++SHDR FLD + T  L F+G   V  + G ++
Sbjct: 534 VVISHDRFFLDRLATHILAFEGDSHVEWFEGNFE 567



 Score =  103 bits (258), Expect = 2e-26
 Identities = 76/263 (28%), Positives = 127/263 (48%), Gaps = 33/263 (12%)

Query: 3   LLKFTDVSLAYGTTPLLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEIWR 62
           +++  ++S AYG   L + +S+ +  G  V +IG NG GKS++ +L+ G  + D G I  
Sbjct: 362 VIEVENLSKAYGDKLLFENLSFTLPAGGIVGVIGPNGAGKSTLFKLITGQETPDSGTIEI 421

Query: 63  APGLKIGELPQELPRAD-DRTVFDVVAEGLAGVGELLAEYHHLSQNIQDEADLEKLMHVQ 121
              +++G + Q     D  + V++ +++GL                     D  K+    
Sbjct: 422 GTTVRLGYVDQSRDHLDPSKNVWEEISDGL---------------------DYMKVNGHD 460

Query: 122 QALEAKDGWRLQQLVDSTLSRLQLPADRTLAELSGGWRRRVLLAQALVSEPDLLLLDEPT 181
           Q+  A  G           +       + + +LSGG R RV +A+ L    ++LLLDEPT
Sbjct: 461 QSTRAYVG---------AFNFKGQDQQKNVGKLSGGERNRVNIAKMLKRGGNVLLLDEPT 511

Query: 182 NHLDIGAIAWLEEALTGFNGAVLFITHDRAFLQNLATRILELDRGHLIDW-NGDYASFLV 240
           N LD+  +  LEEA+  F G  + I+HDR FL  LAT IL  +    ++W  G++ ++  
Sbjct: 512 NDLDVETLGALEEAIENFAGCAVVISHDRFFLDRLATHILAFEGDSHVEWFEGNFEAYEE 571

Query: 241 HKEQQLA-AEETANALFDKKLAQ 262
            K ++L  A +    L  KKL +
Sbjct: 572 DKRRRLGDAADRPTRLAYKKLTR 594