Pairwise Alignments

Query, 633 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Pseudomonas stutzeri RCH2

Subject, 614 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  415 bits (1066), Expect = e-120
 Identities = 243/638 (38%), Positives = 345/638 (54%), Gaps = 46/638 (7%)

Query: 3   LLKFTDVSLAYGTTPLLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEIWR 62
           LL+ +D+ L YG  P+  G+   I  G+RV ++GRNG+GKS++++++ G    D G++  
Sbjct: 6   LLQLSDIRLGYGGDPVFAGLDLVIQPGDRVALVGRNGSGKSTLMKVMAGLVEPDTGQVIA 65

Query: 63  APGLKIGELPQELPRADDRTVFDVVAEGLAGVGELLAEYHHLSQNIQDEADLEKLMHVQQ 122
           APG  IG + Q           D    G   +G+                        + 
Sbjct: 66  APGTSIGYMEQ-----------DPDLSGFPTLGDF----------------------ARA 92

Query: 123 ALEAKDGWRLQQLVDSTLSRLQLPADRTLAELSGGWRRRVLLAQALVSEPDLLLLDEPTN 182
           AL+  + WR    +D     L+L  D      SGG RRR  LA+ L   P L+LLDEPTN
Sbjct: 93  ALDPSESWR----IDMAAEGLKLDLDIATDAASGGERRRAALARLLAEAPHLMLLDEPTN 148

Query: 183 HLDIGAIAWLEEALTGFNGAVLFITHDRAFLQNLATRILELDRGHLIDWNGDYASFLVHK 242
           HLDI AI+WLE+ LT    A + I+HDRAFL  L    L +DRG +      ++ F   +
Sbjct: 149 HLDIEAISWLEDHLTSTRAAFVLISHDRAFLSALTRATLWIDRGMVRRQERGFSDFEAWR 208

Query: 243 EQQLAAEETANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRAERSERRNVQGKA 302
           ++    E+ A    D+K+  E  W  +GI ARR RN+GRVRAL  LR +R++    QG A
Sbjct: 209 DKTWEEEDLARHKLDRKIKAEARWAVEGISARRKRNQGRVRALGELRQQRADMIRRQGTA 268

Query: 303 TFQVETAEKSGKQVIVAEQVTFAHVGGEPLIRDFSMVIQRGDRIGLLGANGTGKTTLLKL 362
              +E    SGK+VI A  +T +  G   ++R F + + RGDRI  +G NG GKTTLLK+
Sbjct: 269 DMALEAGRSSGKRVIEARGITKSF-GDRTILRPFDLRVLRGDRIAFVGPNGAGKTTLLKM 327

Query: 363 LLGELHPSSGSIEFGTKLEVAYFDQLRHQLELEKTVVDNLAEGREF--------ITIDGQ 414
           L GE+ P  G++  GT LE+A FDQ R  L+ + ++ +NL    E         + + G 
Sbjct: 328 LTGEIAPDDGTVTLGTNLEIAVFDQRREGLDPDASLWENLTGDPEMRVSGQADQVMVRGT 387

Query: 415 NRHVLSYLGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETL 474
            RHV+ YL DFLF+  +AR+PV+ALSGGERARLLLA++ ++ +NLLVLDEPTNDLD+ETL
Sbjct: 388 PRHVVGYLKDFLFTDDQARSPVRALSGGERARLLLARIMARESNLLVLDEPTNDLDIETL 447

Query: 475 ELLEEVLLGFQGTVLMVSHDRAFLDNVVTSTLVFQGGGEVREYVGGYQDWLRQGGSPRLL 534
           +LL+E+L  + GTVL+VSHDR FLD V T+T+  +G G    Y GG+ D+  Q  +    
Sbjct: 448 DLLQEILSDYPGTVLLVSHDRDFLDRVATTTIAMEGDGRATAYAGGWSDYRSQRAAGGGT 507

Query: 535 GVAESGGEAKKAQQAPVAAVVAEVAPAKKKLSYKLQRELEALPGQIDEAEKAIEALQAEI 594
                    K   ++P +   +        LS+  +  L+ALPG+ID     I  L+  +
Sbjct: 508 SAPPPKSAGKPGPKSPTSNSDSIRKSNASGLSFTQRHRLDALPGEIDRLTAEIAKLEEFL 567

Query: 595 SDPAFYQQAADKTAAVLSRLEALQAELDGLLERWAELE 632
           + P  Y +   K       L   Q  L    E W +LE
Sbjct: 568 ATPDLYTREPAKFKKATEALVDRQTTLAAAEEEWLDLE 605