Pairwise Alignments

Query, 360 a.a., glycine cleavage system T protein from Pseudomonas stutzeri RCH2

Subject, 361 a.a., putative aminomethyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  210 bits (534), Expect = 5e-59
 Identities = 136/363 (37%), Positives = 191/363 (52%), Gaps = 22/363 (6%)

Query: 5   TPLYDQHLALGAKMVDFGGWDMPLHYGSQVEEHHQVRRDCGVFDVSHMTVVDVAGEQATA 64
           TP  ++H+ALGAKM +F G++MP+ Y   ++EH  V    GVFDVSHM    V G QA A
Sbjct: 4   TPFTEKHIALGAKMHEFAGYNMPIEYSGIIDEHLTVCNAVGVFDVSHMGEFWVKGPQALA 63

Query: 65  YLQHLLANDVTRLKGTGRALYTAMLNERGGVIDDLIVYLSE-WGYRLVVNASTREKDLAW 123
           +LQ + +N+V  L   G+  YT   NE GG++DDL+VY  E   Y LVVNA+  EKD  W
Sbjct: 64  FLQKVTSNNVAALV-PGKIQYTCFPNEEGGIVDDLLVYCYEPEKYLLVVNAANIEKDWNW 122

Query: 124 MQQQAAGFAVEVKERPELAMLAIQGPHARTRTAELVSQARATLIQELKPFQGLAEGDW-- 181
                   A        +A LA+QGP A     +L     + +     P+     G +  
Sbjct: 123 CVSHNTEGAELENSSDNMAQLAVQGPKAILALQKLTDIDLSAI-----PYYTFTVGRFAG 177

Query: 182 ----FIGRTGYTGEDGLEIILPAEQAPDFLSELVGA----GIPPIGLGARDTLRLEAGLN 233
                I  TGYTG  G E+    + A      +  A    GI P+GLGARDTLRLE G  
Sbjct: 178 KENVIISNTGYTGAGGFELYFYPDAAEAIWKAVFEAGEEFGIKPVGLGARDTLRLEMGFC 237

Query: 234 LYGQDMTEDVSPLAANMGWTVAWEPTERDFVGRAALEQQRAQGDLPKLVGLVLEERGVLR 293
           LYG D+ +  SP+ A +GW   +    ++F+ R  LE+Q+++G   KLVG  + +RG+ R
Sbjct: 238 LYGNDLDDKTSPIEAGLGWITKF-VEGKEFINRPMLEKQKSEGTTRKLVGFEMIDRGIPR 296

Query: 294 -AHQVVRVNGVGDGEITSGSFSPTLGKSIALARVP---AGTGERAEVEIRGKWYPVRVVQ 349
             +++V   G G G +TSG+ SPT    I +  V    A  G    +++RG+     VV+
Sbjct: 297 HGYELVNEEGEGIGVVTSGTMSPTRKIGIGMGYVKPEYAKVGTEICIDMRGRKLKAIVVK 356

Query: 350 PTF 352
           P F
Sbjct: 357 PPF 359