Pairwise Alignments

Query, 351 a.a., pseudaminic acid synthase from Pseudomonas stutzeri RCH2

Subject, 290 a.a., polysaccharide biosynthesis related-protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  112 bits (280), Expect = 1e-29
 Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 12/229 (5%)

Query: 20  PYIIAELSANHNGRLETALRIIEEAKKAGADAIKLQTYTADTITLNCDSEEFQIHGGLWG 79
           P  IAE+S+NH+  L+  +  I+ A + G DA+K Q +  + +       + ++H     
Sbjct: 6   PLFIAEVSSNHHRDLQRCIEFIKTAAEIGCDAVKFQLFKIEELFAPEILSKSEMH----- 60

Query: 80  GKTLYQLYQEAHMPWDWHKPLFEHARSHDITIFSSPFDNTAVDLLEDLNAPAYKIASFEA 139
                +  +E  +P  +   L +    + I    +PF   AV  LE      YKIAS+E 
Sbjct: 61  -----RKRKEWELPVSFLPQLKQSCDEYGIQFSCTPFYLDAVAELEPF-VDFYKIASYEL 114

Query: 140 VDLPLIKYVASTGKPMIISTGMADAEEIQEAIDAAREGGCKELAILHCVSGYPAPAEDYN 199
           +   L+     TGKP++IS GMA  EEI  A+   +E G  ++ +LHCVS YP P  + N
Sbjct: 115 LWDDLLAACVKTGKPVVISAGMATIEEIDHALKTLKENGASDITLLHCVSAYPTPEHECN 174

Query: 200 LRTIPDMMQRFGLVTGLSDHTLDNTTAIASV-VLGASIIEKHFTLDRNG 247
           L  +     R+ +  G SDHT+ +     +V    A ++E H  LD  G
Sbjct: 175 LAVLGSFRNRYQVKVGWSDHTVSSAVINRAVHRWEADVVEFHLDLDETG 223