Pairwise Alignments

Query, 230 a.a., pseudaminic acid CMP-transferase from Pseudomonas stutzeri RCH2

Subject, 245 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 45.1 bits (105), Expect = 1e-09
 Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 13/160 (8%)

Query: 5   IIPARGGSKRIPRKNIKPFCGKPMIAWSIEAALQSGCFDRVVVSTDDAEIADVALQHGAD 64
           +IPAR GS R P K + P  GKPMI    E A  +     + V+TDD  I +     G  
Sbjct: 6   LIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLTAIYVATDDLRIKEAVEAFGGK 65

Query: 65  VPFT-RPAELSDDRTGTVPVIRHAIEWFSQAGLAVEQ-VCCLYATAPFVTAEDLDRGMQV 122
           V  T   A    DR      I  AI   +Q GLA +  V  L    P +    +++ + +
Sbjct: 66  VVMTDANAASGTDR------IEDAI---TQLGLADDDLVINLQGDQPLIDPISIEQIITL 116

Query: 123 LQGNDCDYAFSVTSYAFPIQRAIRINAQGRVEMFNPEYFN 162
            + +  +  F + +  + I     +N    V+M     FN
Sbjct: 117 FERHPGE--FGMATLGYEITEEHELNDPKHVKMVFDNQFN 154