Pairwise Alignments

Query, 332 a.a., UDP-N-acetylglucosamine 4,6-dehydratase from Pseudomonas stutzeri RCH2

Subject, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  126 bits (316), Expect = 2e-33
 Identities = 92/303 (30%), Positives = 159/303 (52%), Gaps = 33/303 (10%)

Query: 3   SDKTILVTGGTGSFGNTFVPMTLARYNPKKIIIFSRDEMKQWDMAKKFEGDK-------R 55
           ++K+++VTG  GS G+      LA+  PK +++F  +E   + + ++ +  K       +
Sbjct: 280 TEKSVMVTGAGGSIGSELCRQILAQ-KPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTK 338

Query: 56  VRFFIGDVRDKDRLYRALDG--VDYVVHAAATKIVPTAEYNPFECVKTNVDGAMNLIDAC 113
           +   +G V+ ++R+ + +    V+ V HAAA K VP  E N  E ++ NV G +   +A 
Sbjct: 339 IVAALGSVQRENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAA 398

Query: 114 IDKGVKGVVALSTDKASSPINLYGATKLASDKLFVAGNSYSGEHGTRFSVVRYGNVMGSR 173
           I+ GVK    +STDKA  P N+ GA+K  ++ +  A    +    T F++VR+GNV+GS 
Sbjct: 399 IEAGVKNFTLISTDKAVRPTNIMGASKRMAELVLQALADKNST--TIFTMVRFGNVLGSS 456

Query: 174 GSVIPFF-MSIKDKGVLPITDERMSRFMISLEEGVELVWHAFEDMEGGEIYVKKI-PSMK 231
           GSV+P F   I+  G + +T   + R+ + + E  +LV  A      G+++V  +   +K
Sbjct: 457 GSVVPLFKKQIRAGGPVTVTHPDIIRYFMLIPEAAQLVIQAGAMSHNGQVFVLDMGEPVK 516

Query: 232 VTDLARVV-------------APEARQEI--IGIRPGEKLHEQMISAEDAYYTYEYPEHF 276
           + DLA+ +             + E   EI   G+RPGEKL+E+++  E+     E   H 
Sbjct: 517 IVDLAKRMIHLMGMKEFCDGRSDEGDIEIKFTGLRPGEKLYEELLIGENV----EGTSHQ 572

Query: 277 KIL 279
           KI+
Sbjct: 573 KIM 575