Pairwise Alignments

Query, 243 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 227 a.a., lipoprotein-releasing ABC transporter ATP-binding protein LolD from Pseudomonas sp. BP01

 Score =  198 bits (504), Expect = 7e-56
 Identities = 108/223 (48%), Positives = 145/223 (65%), Gaps = 2/223 (0%)

Query: 13  VLRLDQVRKAFNVGTPLETEVLHGIDLSLYRGELAALIGPSGSGKSTLLNLIGLLDAPSS 72
           VL    + K+++ G P   +VL G++L L+ GE  A++G SGSGKSTLLNL+G LD P+ 
Sbjct: 6   VLSCRNLGKSYDEG-PESVKVLSGLNLELHAGERVAIVGSSGSGKSTLLNLLGGLDRPTQ 64

Query: 73  GELYLLGQATRDSDDETRTHLRNQAIGFVFQFHHLISAFSVLENVLMPLMIRHGKPSPAD 132
           G ++L G+      +  R  LRN+ +GFV+QFHHL+  F+ +ENV MPL+I    P P  
Sbjct: 65  GSVWLAGEELSALGERARGLLRNRELGFVYQFHHLLPEFTAIENVCMPLLIGR-TPIPEA 123

Query: 133 IELARGLLDEVGLGAFADKKPTQISGGQQQRVAIARALVTRPPLLLADEPTGNLDTRTAQ 192
            E A  LL  VGLG     KP ++SGG++QRVAIARALV RP L++ DEPTGNLD  TAQ
Sbjct: 124 RERAEALLKRVGLGHRLTHKPAELSGGERQRVAIARALVNRPGLVMLDEPTGNLDHHTAQ 183

Query: 193 SVFELFHRINAQFGCAVLVVTHDPRLAADCARTIQLVDGHIVS 235
            + EL   +++    A LVVTHD  LA    R ++L DGH+V+
Sbjct: 184 GIQELMQELSSSSRTAFLVVTHDLNLARQMDRVLKLDDGHLVA 226