Pairwise Alignments

Query, 269 a.a., CheW-like domain. from Pseudomonas stutzeri RCH2

Subject, 291 a.a., chemotaxis protein CheW from Pseudomonas fluorescens FW300-N2C3

 Score =  351 bits (900), Expect = e-101
 Identities = 188/290 (64%), Positives = 210/290 (72%), Gaps = 28/290 (9%)

Query: 1   MSRTVLTETRSQLALQSYLDGLLQDAAIELADSVSQ--------------DEFQAAVLEE 46
           M+R V T +R Q+ALQSYLDGLLQ+A  EL    S               DEFQAAVLEE
Sbjct: 1   MNRPVKTTSRPQMALQSYLDGLLQEATEELPPPPSVIEALPEHVEAEGVLDEFQAAVLEE 60

Query: 47  QLRDTRQSQ----------PPRLEIVQPAAPVPPAVVVPEVMLPSTPSVEPVVRVEVVPQ 96
           Q RD R+S            P+L +++  AP+   V     +L     V PVV V + P 
Sbjct: 61  QARDARKSVVAAAVEAPFIKPQLAVMEALAPILAPVSTVAPLLQGL--VTPVVEVHLPPS 118

Query: 97  TPAAPVEVVADGQPAWAEEPFECLLFDVAGLTLAVPLVCLGSIYPLADQELTPLFGQPDW 156
            P  PV    D +PAWA EPFECLLFDVAGLTLAVPLVCLGSIY LA QELTPLFGQP+W
Sbjct: 119 NPPPPVP--GDDRPAWAAEPFECLLFDVAGLTLAVPLVCLGSIYSLAGQELTPLFGQPEW 176

Query: 157 FLGILPSQAGNLKVLDTARWVMPDRYREDFREGLQYVISVQGYEWGLAVHQVSRSIRLDP 216
           FLGILPSQAGNLKVLDTARWVMPDRYR+DFR+GLQYVISVQGYEWGLAVHQVSRS+RLDP
Sbjct: 177 FLGILPSQAGNLKVLDTARWVMPDRYRDDFRQGLQYVISVQGYEWGLAVHQVSRSLRLDP 236

Query: 217 SEVKWRTQRSQRPWLAGTVIEHMCALVDVTALAELIASGAVKQLPGAAKP 266
           +E+KWR+ R QRPWLAGTVIEHMCAL+DV  LAELIASG  K L G+ KP
Sbjct: 237 NEIKWRSHRGQRPWLAGTVIEHMCALLDVAELAELIASGGAKHLGGSKKP 286