Pairwise Alignments

Query, 269 a.a., CheW-like domain. from Pseudomonas stutzeri RCH2

Subject, 338 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score =  122 bits (305), Expect = 1e-32
 Identities = 82/235 (34%), Positives = 122/235 (51%), Gaps = 37/235 (15%)

Query: 28  IELADSVSQDEFQAAVLEEQLRDTRQSQPPRLE--IVQPAAPVPPAVVVPEVMLPSTPSV 85
           IE  +SV +D+     LE +  DT   +   +E  I +P A VP                
Sbjct: 126 IETPESVIEDD-----LEPESVDTEAEREIAIETSIEEPVAEVP---------------- 164

Query: 86  EPVVRVEVVPQTPAAPVEVVADGQPAWA----EEPFECLLFDVAGLTLAVPLVCLGSIYP 141
             VV  + VP+T A   ++       W     E+ F+ L FDV G+T AVPL  LG I+ 
Sbjct: 165 --VVEAQAVPETQAGRNKL-----GTWTNTIREKDFQVLYFDVNGVTFAVPLDELGGIHR 217

Query: 142 LADQELTPLFGQPDWFLGILPSQAGNLKVLDTARWVMPDRYR-EDFREGLQYVISVQGYE 200
           +    L  L G+P W+LG+  ++   L V+DTA+WVM ++ R E +++  QY++ +    
Sbjct: 218 MTT--LNHLIGRPAWYLGLQTNRDSQLDVVDTAKWVMAEKLRDESYKQAYQYIVMLGESA 275

Query: 201 WGLAVHQVSRSIRLDPSEVKWRTQRSQRPWLAGTVIEHMCALVDVTALAELIASG 255
           WGLA  Q+  +  L   +V+WR Q  +RPWLAG V E MCAL+ V AL  ++ +G
Sbjct: 276 WGLASTQLMGTELLSTEKVRWREQVGKRPWLAGMVKEKMCALIHVQALIAMLNAG 330