Pairwise Alignments

Query, 219 a.a., ectoine/hydroxyectoine ABC transporter, permease protein EhuD from Pseudomonas stutzeri RCH2

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (326), Expect = 3e-35
 Identities = 82/216 (37%), Positives = 121/216 (56%), Gaps = 9/216 (4%)

Query: 4   FDWQFAREILPRLLDASLTTIGIALAGFAIAVVLGLFLAIGRRSRLRWLSWPITGL-IEF 62
           FD+ +  E+LP LL    TT+ +A  G   A++L LFLA  R  ++  L  P++ L I F
Sbjct: 3   FDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLD-PLSQLYISF 61

Query: 63  IRSTPLLIQVYFLFYVFPNYG---LNLSAMQAGIIGIALHYACYTAEVYRAGLDAVPRSQ 119
            R TPLL+Q++ L+Y  P      + L A  A +IG+ LH+A Y AE  RA +  + RSQ
Sbjct: 62  FRGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQ 121

Query: 120 WEAVTALNMKPWTAYRDVILPQALRPVLPALGNYLISILKDTPVLSAITVVEIMQRAKNI 179
            EA  ++ M    A R +ILPQA R  LP+L NY I ++K T +   + V EIM +A+  
Sbjct: 122 MEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQME 181

Query: 180 GSESFRYLEPITMVGIFFLILSLGL----AWCVRRL 211
            S SFR+ E    V + + ++ L L    +W  ++L
Sbjct: 182 ASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217