Pairwise Alignments

Query, 852 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 564 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  356 bits (913), Expect = e-102
 Identities = 189/439 (43%), Positives = 265/439 (60%), Gaps = 5/439 (1%)

Query: 410 YRGTASDVTEETKAQARVQYLSQHDPLTGLPNRSRLRDYLEQNLASLRSGSTMTLLYIDL 469
           YR T S    +   +A + + + HD LTGLPNR +  D L   L  + +G+ + L+ IDL
Sbjct: 117 YRETFSQGESD---RALLLHQATHDVLTGLPNRRQFSDQLRGALP-VPNGARLALMQIDL 172

Query: 470 DRFKPVNDTLGHAAGDEVLMGVASRLRERTRDGDLVARLGGDEFVVALHRMSEDEDIDRL 529
           D FKP+NDTLGH AGD VL   A R+R   RD +   RL GDEF V   R  +  + +RL
Sbjct: 173 DDFKPINDTLGHGAGDAVLKMAADRIRSVLRDREFAYRLAGDEFAVIQWRADQPREAERL 232

Query: 530 CNRIIEALSSPFAYENHQISIGASIGVALAPMDATQANELLRCADIALYQAKDAGRGTWR 589
            + +I A   PF  E   + +GAS+G+A+AP D  +  +L++ ADIALY AK  GRG   
Sbjct: 233 ADALINAFKEPFTVEGINVFVGASVGIAVAPADGNEVEQLMKAADIALYAAKKDGRGRSS 292

Query: 590 AYGRDMDQRLHERLRREEQLRVAIAEQHLEVHYQPRYLSQGMRIIGAEALVRWHHPTHGL 649
            + R M   L +R      LR A+ E    + YQP  +     ++G EAL+RW HP  G+
Sbjct: 293 TFTRSMLIVLEQREMLRRSLRTALQEGQFFLEYQP-LVKPSSSVVGFEALLRWRHPLVGI 351

Query: 650 LLPEQFIPLAEETGLIIPLGRWVLQQACQQAATWPVDMVVSVNLSPLQLHDDRLLDEISQ 709
           + P  FIP+AE  GL+  +GRW+L++AC+ A  WP    ++VNLSP +   + L D ++Q
Sbjct: 352 IPPNVFIPMAEADGLMSDIGRWLLERACRAAMDWPSHFTIAVNLSPAEFLHEGLTDRVAQ 411

Query: 710 ALHENGLAGERLELEITESALLQETQSTLDLLKRIKALGVHLAVDDFGTGYSSLTSLRHY 769
            L   G+  +RLELEITES LL+ T + LD L  +  LGV +++DDFGT YSSL+ L+++
Sbjct: 412 TLDLVGMRADRLELEITESVLLERTINNLDTLNTLNVLGVQISLDDFGTFYSSLSYLKNF 471

Query: 770 PFDVIKIDNSFVAGIEQSMEDHSIVRALIELGRGLQMRVTAEGVETEEQLRLLTDDGCTE 829
           PFD IKID  F+  +E+  +  +IVR++I L  GL M VTAEGVET EQ   L  +GC  
Sbjct: 472 PFDTIKIDQYFIRDLERDEKSQTIVRSIIALAHGLGMNVTAEGVETAEQAIWLQKEGCDR 531

Query: 830 VQGFHMSLPMPAEELRRLL 848
           +QG+ + +PM AE +   L
Sbjct: 532 LQGYFLGVPMRAEAIADFL 550