Pairwise Alignments

Query, 450 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Pseudomonas stutzeri RCH2

Subject, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 17/183 (9%)

Query: 281 FVQVNAPVNDAMVAQALEWLDAGKDEAVLDLFCGLGNFSLPLARSGARVVGVEGVEAMVA 340
           F Q NA V + M+  A++     K + +L+L+CG GNFSL LA++  RV+  E  +  V 
Sbjct: 188 FTQPNAKVAEKMLEWAVDCTQESKGD-LLELYCGNGNFSLALAQNFERVLATELAKPSVE 246

Query: 341 RAQENAQRNALEHAHFYRADLSK------------PLADAPWAGSGFA--AVLLDPPRDG 386
            AQ N   N + +    R    +             L DA      +    + +DPPR G
Sbjct: 247 AAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRSG 306

Query: 387 ALEIVRQMSMLKAQRVVYVSCNPATLARDARELASQGYRLKRAGVLDMFPQTAHVEAMAL 446
            ++I     +   +R++Y+SCNP TL  + + L  + +++ R  + D FP T H+EA  +
Sbjct: 307 -MDIDTCKMVQGYERILYISCNPETLQENLQVL-GETHQVVRFALFDQFPYTHHMEAGVM 364

Query: 447 FER 449
            ER
Sbjct: 365 LER 367